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The map label for this gene is yajC [H]

Identifier: 88658288

GI number: 88658288

Start: 1034477

End: 1034854

Strand: Direct

Name: yajC [H]

Synonym: ECH_1008

Alternate gene names: 88658288

Gene position: 1034477-1034854 (Clockwise)

Preceding gene: 88657834

Following gene: 88658239

Centisome position: 87.95

GC content: 32.8

Gene sequence:

>378_bases
ATGTCACTTATCTCTGAAGTCTTTGCAGCAGCAGCAACAACAGCACCTGCTTCGGGAATAGGTAGTTCAATTGCAGGTTT
AATTCCCTTAGTATTAATTTTTTGTGTCTTCTATTTTTTTATAATTAGACCTCAACAAAAAAAGATTAAAGAGCATAATA
AACTGCTAGATAATATAAAAAAAGGTGATAAAGTTGTCATTTCTGGCAGTATACTGGGATCAGTTACGAAAGTCGATACA
ACAAATGGGCACTTTATTGTTGAAATATCAGAAGGAGTTGAAGTTAAAGTATTAAAGTCTTCAGTATCTGAAGTGTTGAA
TAAAAATAACAAGCCTACTTCAACTGCAGAAGCATCAGTTGCAGCTTCTAATAATTAA

Upstream 100 bases:

>100_bases
AGCTAATTTCCTATATATTAGATTTTAAGCCAAATTGATATTGACAACCAACACTATTCTTGATACATTGATTTTATTAA
CCTACTCTTTGGTATTAAAA

Downstream 100 bases:

>100_bases
TACATAACTAAATCTTCATTCGAGAAAAAGAGTGTTTATATTTCCTTATTAATTTTAAGGACACCTTTTTTAACAAACAG
CCAATTTTAGATAATATAAA

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSLISEVFAAAATTAPASGIGSSIAGLIPLVLIFCVFYFFIIRPQQKKIKEHNKLLDNIKKGDKVVISGSILGSVTKVDT
TNGHFIVEISEGVEVKVLKSSVSEVLNKNNKPTSTAEASVAASNN

Sequences:

>Translated_125_residues
MSLISEVFAAAATTAPASGIGSSIAGLIPLVLIFCVFYFFIIRPQQKKIKEHNKLLDNIKKGDKVVISGSILGSVTKVDT
TNGHFIVEISEGVEVKVLKSSVSEVLNKNNKPTSTAEASVAASNN
>Mature_124_residues
SLISEVFAAAATTAPASGIGSSIAGLIPLVLIFCVFYFFIIRPQQKKIKEHNKLLDNIKKGDKVVISGSILGSVTKVDTT
NGHFIVEISEGVEVKVLKSSVSEVLNKNNKPTSTAEASVAASNN

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=102, Percent_Identity=44.1176470588235, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 13203; Mature: 13072

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLISEVFAAAATTAPASGIGSSIAGLIPLVLIFCVFYFFIIRPQQKKIKEHNKLLDNIK
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
KGDKVVISGSILGSVTKVDTTNGHFIVEISEGVEVKVLKSSVSEVLNKNNKPTSTAEASV
CCCEEEEECHHHCCEEEEECCCCEEEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCC
AASNN
CCCCC
>Mature Secondary Structure 
SLISEVFAAAATTAPASGIGSSIAGLIPLVLIFCVFYFFIIRPQQKKIKEHNKLLDNIK
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
KGDKVVISGSILGSVTKVDTTNGHFIVEISEGVEVKVLKSSVSEVLNKNNKPTSTAEASV
CCCEEEEECHHHCCEEEEECCCCEEEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCC
AASNN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]