| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658137
Identifier: 88658137
GI number: 88658137
Start: 675185
End: 676594
Strand: Direct
Name: 88658137
Synonym: ECH_0665
Alternate gene names: NA
Gene position: 675185-676594 (Clockwise)
Preceding gene: 88658547
Following gene: 88658561
Centisome position: 57.4
GC content: 28.87
Gene sequence:
>1410_bases ATGTCTTATAATTTCCTAGATTTCCTCAAATTATGCTTTAAAACAGTATCACCAAATAATCAAATAATAAATAATTGGCA TCTCAAAATCATAACAGACAGACTGGAAGCTACCCTCAATGGAAAAATCAATCGTTTAATCATCAACATGCCTCCAAGAT TTATCAAATCCATATGTGTTAGCATAGCATGGCCATCATGGGTCCTTGGATTAAAACCTCAAACCAGAATTATAGTTGCA AGTTATTCTCAAATACTCAGTGAAAAATTATCTTTAGACAACCGATATATACTACAATCTGAATGGTATCAAAAACTATT CCCACATGTAATATTATCAAAAGACCAAAATACTAAACAAAAATTTCAAACAATACAAAGAGGTTATAGGTTTGCAACAT CAATAGGAGGAAGTATTACAGGAGAAGGTGGAGATATTTTAATTATTGATGATCCAATGAATCCTATGCAAGCACTAAGT AAAACTTATAGACAACGTGTATGCCATTGGTTTGAACAATCATTTATGACTAGACTAAATGATCGCAAAAACAGCAGTGT TATAATAGTAATGCACAGATTACATACAGATGATTTAACTGGGTATTTATTATCAAAAAAAACTCATAACAAATGGCATA TACTATCACTCCCAATGGTAGCAGAAAAAAATAATATTTTTTACTCTGTTACTTCACCATGGAAATTTAAATATGGGAAA AAAACAAGAAATATTTTACATATAAGAAAAGAAGGAGATCCTCTATATAAAAAATATGGAAGGAAATATATAGAAGAATT AAAATCAGAACTCGGGTCATACACATTTGCAGCCCAATATCAACAAAATCCTATTCTTTTATCAAGTGGCATAATAAAAT ATAAATGGATTCAAAGATATACTTCTTATGATAATGAAGATAGCAATATAACTCAAAGTTGGGATACCGCATCTTCTTCT AATAACAAAAGTGATTACAGTGTATGCACAACATGGTCTTATACAAACAACTGCTTCTTCTTGTTAGAAATATACAAAGC AAAACTAGAATATCAATCATTAAAACAAGAAATAATAAATTTAGCAAATCACTGGAAACCTAATGCAATACTTATAGAAA AAAAAGCAAGTGGATTACAAATTATTCAAGAATTAAGTAATATTAGTACAATACCTATTATAGGTATTATTCCAACAACT AATAAAACGACCAGGTTTTATAAGATTATTCCCATATTTGAATCTCGAAAAATATTTTTACCATATGATTCTCCATGGCT TAGTGATTTTGAACAAGAATTGCTATCATTTCCAAATACACAAAATGATGATCAAATCGATAGTATGACACAATACTTAC ATTGGATTAACAATAACATTACAAACAATGTCATCATCAGAGAAATATAA
Upstream 100 bases:
>100_bases CTTTATAAGTATAGTATACTTACACTTAATAATAATACACAATATTATAGTCATTATAATATTGGAGAATTTTATATGTT AAAATAATCATCTTTATAAA
Downstream 100 bases:
>100_bases GTTCACAATTTTCACAATATAACCTCTTATGATTAATCGTTATAATTATCAACATCTCTATATATACAGAAAAAAAATAT GACTAAAATAATAACATGAT
Product: phage uncharacterized protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSYNFLDFLKLCFKTVSPNNQIINNWHLKIITDRLEATLNGKINRLIINMPPRFIKSICVSIAWPSWVLGLKPQTRIIVA SYSQILSEKLSLDNRYILQSEWYQKLFPHVILSKDQNTKQKFQTIQRGYRFATSIGGSITGEGGDILIIDDPMNPMQALS KTYRQRVCHWFEQSFMTRLNDRKNSSVIIVMHRLHTDDLTGYLLSKKTHNKWHILSLPMVAEKNNIFYSVTSPWKFKYGK KTRNILHIRKEGDPLYKKYGRKYIEELKSELGSYTFAAQYQQNPILLSSGIIKYKWIQRYTSYDNEDSNITQSWDTASSS NNKSDYSVCTTWSYTNNCFFLLEIYKAKLEYQSLKQEIINLANHWKPNAILIEKKASGLQIIQELSNISTIPIIGIIPTT NKTTRFYKIIPIFESRKIFLPYDSPWLSDFEQELLSFPNTQNDDQIDSMTQYLHWINNNITNNVIIREI
Sequences:
>Translated_469_residues MSYNFLDFLKLCFKTVSPNNQIINNWHLKIITDRLEATLNGKINRLIINMPPRFIKSICVSIAWPSWVLGLKPQTRIIVA SYSQILSEKLSLDNRYILQSEWYQKLFPHVILSKDQNTKQKFQTIQRGYRFATSIGGSITGEGGDILIIDDPMNPMQALS KTYRQRVCHWFEQSFMTRLNDRKNSSVIIVMHRLHTDDLTGYLLSKKTHNKWHILSLPMVAEKNNIFYSVTSPWKFKYGK KTRNILHIRKEGDPLYKKYGRKYIEELKSELGSYTFAAQYQQNPILLSSGIIKYKWIQRYTSYDNEDSNITQSWDTASSS NNKSDYSVCTTWSYTNNCFFLLEIYKAKLEYQSLKQEIINLANHWKPNAILIEKKASGLQIIQELSNISTIPIIGIIPTT NKTTRFYKIIPIFESRKIFLPYDSPWLSDFEQELLSFPNTQNDDQIDSMTQYLHWINNNITNNVIIREI >Mature_468_residues SYNFLDFLKLCFKTVSPNNQIINNWHLKIITDRLEATLNGKINRLIINMPPRFIKSICVSIAWPSWVLGLKPQTRIIVAS YSQILSEKLSLDNRYILQSEWYQKLFPHVILSKDQNTKQKFQTIQRGYRFATSIGGSITGEGGDILIIDDPMNPMQALSK TYRQRVCHWFEQSFMTRLNDRKNSSVIIVMHRLHTDDLTGYLLSKKTHNKWHILSLPMVAEKNNIFYSVTSPWKFKYGKK TRNILHIRKEGDPLYKKYGRKYIEELKSELGSYTFAAQYQQNPILLSSGIIKYKWIQRYTSYDNEDSNITQSWDTASSSN NKSDYSVCTTWSYTNNCFFLLEIYKAKLEYQSLKQEIINLANHWKPNAILIEKKASGLQIIQELSNISTIPIIGIIPTTN KTTRFYKIIPIFESRKIFLPYDSPWLSDFEQELLSFPNTQNDDQIDSMTQYLHWINNNITNNVIIREI
Specific function: Unknown
COG id: COG5410
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004921 [H]
Pfam domain/function: PF03237 Terminase_6 [H]
EC number: NA
Molecular weight: Translated: 54974; Mature: 54843
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYNFLDFLKLCFKTVSPNNQIINNWHLKIITDRLEATLNGKINRLIINMPPRFIKSICV CCCCHHHHHHHHHHHCCCCCCEECCEEEEEEEEHHHHHHCCCEEEEEEECCHHHHHHHHH SIAWPSWVLGLKPQTRIIVASYSQILSEKLSLDNRYILQSEWYQKLFPHVILSKDQNTKQ HHCCCHHEECCCCCCEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCEEECCCCCHHH KFQTIQRGYRFATSIGGSITGEGGDILIIDDPMNPMQALSKTYRQRVCHWFEQSFMTRLN HHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC DRKNSSVIIVMHRLHTDDLTGYLLSKKTHNKWHILSLPMVAEKNNIFYSVTSPWKFKYGK CCCCCCEEEEEEECCCCCHHHHEECCCCCCCEEEEECCEEECCCCEEEEECCCEEEECCC KTRNILHIRKEGDPLYKKYGRKYIEELKSELGSYTFAAQYQQNPILLSSGIIKYKWIQRY CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCHHHHHHHHH TSYDNEDSNITQSWDTASSSNNKSDYSVCTTWSYTNNCFFLLEIYKAKLEYQSLKQEIIN HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHH LANHWKPNAILIEKKASGLQIIQELSNISTIPIIGIIPTTNKTTRFYKIIPIFESRKIFL HHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCEEEE PYDSPWLSDFEQELLSFPNTQNDDQIDSMTQYLHWINNNITNNVIIREI CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure SYNFLDFLKLCFKTVSPNNQIINNWHLKIITDRLEATLNGKINRLIINMPPRFIKSICV CCCHHHHHHHHHHHCCCCCCEECCEEEEEEEEHHHHHHCCCEEEEEEECCHHHHHHHHH SIAWPSWVLGLKPQTRIIVASYSQILSEKLSLDNRYILQSEWYQKLFPHVILSKDQNTKQ HHCCCHHEECCCCCCEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCEEECCCCCHHH KFQTIQRGYRFATSIGGSITGEGGDILIIDDPMNPMQALSKTYRQRVCHWFEQSFMTRLN HHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC DRKNSSVIIVMHRLHTDDLTGYLLSKKTHNKWHILSLPMVAEKNNIFYSVTSPWKFKYGK CCCCCCEEEEEEECCCCCHHHHEECCCCCCCEEEEECCEEECCCCEEEEECCCEEEECCC KTRNILHIRKEGDPLYKKYGRKYIEELKSELGSYTFAAQYQQNPILLSSGIIKYKWIQRY CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCHHHHHHHHH TSYDNEDSNITQSWDTASSSNNKSDYSVCTTWSYTNNCFFLLEIYKAKLEYQSLKQEIIN HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHH LANHWKPNAILIEKKASGLQIIQELSNISTIPIIGIIPTTNKTTRFYKIIPIFESRKIFL HHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCEEEE PYDSPWLSDFEQELLSFPNTQNDDQIDSMTQYLHWINNNITNNVIIREI CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]