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The map label for this gene is rpsU

Identifier: 88658072

GI number: 88658072

Start: 1001000

End: 1001272

Strand: Direct

Name: rpsU

Synonym: ECH_0978

Alternate gene names: NA

Gene position: 1001000-1001272 (Clockwise)

Preceding gene: 88658150

Following gene: 88658279

Centisome position: 85.1

GC content: 37.36

Gene sequence:

>273_bases
TTGGTTGAAGTTATAGTTTACCATGGAGATATAGAACAAGGTATACGTACCCTTAAAAAGAAGTTACAACGTGAGGGAAA
ACCTAGGCAGATGAAAATTACTCACCATGAGAAACCATCAGAAAAACGTGCAAGAAAAAAGGATGATTGTGAAAGAAGAA
GAAAAAAATTGCACAAGGTGCCTTACGAACCGCAGTTTACTAAGTTTCAAGTTAGTGCTAGACATTTTCAGGTGAAGAGG
CCTTCTCAAGCTGATAATAGCACTAGTGAATGA

Upstream 100 bases:

>100_bases
TTAGTATTTTTATAATCATAATTTCTTAAAAAGAATTTGACATAATTAATTTGTTGTTGGTATCATTATTGCTCGATTTA
TCTATATAGGAGGACTTTCT

Downstream 100 bases:

>100_bases
GCATAAATTTATACTATAGCTCATCTATATTTTTAATCAGTAGTCAGAGTTCAAGTAAGGTGTATTAATATGAATATTCA
TGAGTATCAGGCAAAGCATA

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: 30s Ribosomal Protein S

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MVEVIVYHGDIEQGIRTLKKKLQREGKPRQMKITHHEKPSEKRARKKDDCERRRKKLHKVPYEPQFTKFQVSARHFQVKR
PSQADNSTSE

Sequences:

>Translated_90_residues
MVEVIVYHGDIEQGIRTLKKKLQREGKPRQMKITHHEKPSEKRARKKDDCERRRKKLHKVPYEPQFTKFQVSARHFQVKR
PSQADNSTSE
>Mature_90_residues
MVEVIVYHGDIEQGIRTLKKKLQREGKPRQMKITHHEKPSEKRARKKDDCERRRKKLHKVPYEPQFTKFQVSARHFQVKR
PSQADNSTSE

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10795; Mature: 10795

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEVIVYHGDIEQGIRTLKKKLQREGKPRQMKITHHEKPSEKRARKKDDCERRRKKLHKV
CEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHCC
PYEPQFTKFQVSARHFQVKRPSQADNSTSE
CCCCCCCEEEEHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure
MVEVIVYHGDIEQGIRTLKKKLQREGKPRQMKITHHEKPSEKRARKKDDCERRRKKLHKV
CEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHCC
PYEPQFTKFQVSARHFQVKRPSQADNSTSE
CCCCCCCEEEEHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA