Definition Ehrlichia chaffeensis str. Arkansas, complete genome.
Accession NC_007799
Length 1,176,248

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The map label for this gene is 88657979

Identifier: 88657979

GI number: 88657979

Start: 1074410

End: 1074784

Strand: Reverse

Name: 88657979

Synonym: ECH_1042

Alternate gene names: NA

Gene position: 1074784-1074410 (Counterclockwise)

Preceding gene: 88658403

Following gene: 88657785

Centisome position: 91.37

GC content: 35.2

Gene sequence:

>375_bases
ATGTTAAAAATTGTTTTAGTGTTTTTTATAATAGTAGGGTTTGTTGGTGTTGCACCGTTGTGTTACTCAGGTGCATATGC
TAACGAGCAAGCTGGTACTGGTGATTCAGATGATGTAAGTAAAGTTATATGTAATGTTATACAGTTTGTGCAAAAGTTGG
GATTGCCAATCATGACAGGGGTAATACTTGGCTCAAGCATTATGGCAATATTTGGAAAATTGCCATGGCCAGCAATAGTA
ATGTTGGTTGTATTTACAGCGATATTTTTTGGAGCAGGAAAATTAATTACTAAGTTTGTTGAAGGGGTGAATAATAATAT
GACTAATGTAAAAGATTGTTCTGCTTTAGTAACGCCAAGTAGCCAGGTTAAGTGA

Upstream 100 bases:

>100_bases
CAGGTAAATTAGTTAGTAAGTTTGTCAGTGGAATTAATAATAATATGACTAGTGGGGCAGATTGTAGTACTACTCCATCA
AAAAAATAAATGAGAGCCTT

Downstream 100 bases:

>100_bases
TGGGTTTTGAAAGTTAAGAATACAGTGATTATGGAATATTGTGATCTATGTAATTTTCGTTCTTAGCTTTACTCAGGTAT
TCTTGCAATAATTTAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLKIVLVFFIIVGFVGVAPLCYSGAYANEQAGTGDSDDVSKVICNVIQFVQKLGLPIMTGVILGSSIMAIFGKLPWPAIV
MLVVFTAIFFGAGKLITKFVEGVNNNMTNVKDCSALVTPSSQVK

Sequences:

>Translated_124_residues
MLKIVLVFFIIVGFVGVAPLCYSGAYANEQAGTGDSDDVSKVICNVIQFVQKLGLPIMTGVILGSSIMAIFGKLPWPAIV
MLVVFTAIFFGAGKLITKFVEGVNNNMTNVKDCSALVTPSSQVK
>Mature_124_residues
MLKIVLVFFIIVGFVGVAPLCYSGAYANEQAGTGDSDDVSKVICNVIQFVQKLGLPIMTGVILGSSIMAIFGKLPWPAIV
MLVVFTAIFFGAGKLITKFVEGVNNNMTNVKDCSALVTPSSQVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13149; Mature: 13149

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIVLVFFIIVGFVGVAPLCYSGAYANEQAGTGDSDDVSKVICNVIQFVQKLGLPIMTG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
VILGSSIMAIFGKLPWPAIVMLVVFTAIFFGAGKLITKFVEGVNNNMTNVKDCSALVTPS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
SQVK
CCCC
>Mature Secondary Structure
MLKIVLVFFIIVGFVGVAPLCYSGAYANEQAGTGDSDDVSKVICNVIQFVQKLGLPIMTG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
VILGSSIMAIFGKLPWPAIVMLVVFTAIFFGAGKLITKFVEGVNNNMTNVKDCSALVTPS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
SQVK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA