| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657903
Identifier: 88657903
GI number: 88657903
Start: 844398
End: 845549
Strand: Direct
Name: 88657903
Synonym: ECH_0830
Alternate gene names: NA
Gene position: 844398-845549 (Clockwise)
Preceding gene: 88658264
Following gene: 88658495
Centisome position: 71.79
GC content: 30.3
Gene sequence:
>1152_bases ATGACAACATCAATGCTAGAAATTCAAGAATCACTACATAATCTTACATCTTCATGGGAAGAGTTTAAAAATCTAAATGA AAAAAAATTATCAGATATAAGTAAAAAAAGTTCTACATACCCATCCATATTAGAAAAATTAGAAAAAACAGAAAGCATGC TAGAAATACAAAATGAAAGATTGGATCAATTAGAAATATCATCACAGCGCCCTGTTACCCATGATAACAAACACTATAAT GAAGATTATAATTATAAAACGTTCACACAATACCTATGTAAAGGCACTAATCTTCAAGGTCAAAGTAGTGTTGTGCAGCC CTTAGATGAATCGTACTTTATACCACATAACATATCATCTTATATAGAAACAAATCTAACTAAGAACTCAGTAATGCGTC AATTATGTTCTATAGAAAAAATATCTGGAGATAGTTTAGACTGCTTTATCAGAAACAACAATGAAAAGTCTGTTAACTGG AGAACAAGCAATAACGTAGAAGATACAGAATCACCAAAAATTGATAAAATTACTATCAATTTACATGAATTATATACTCA ACCAAAAATAACAAAGAAATTACTAGAAGATTCTACTATAGATGTAGCCAGCTGGTTAATTAATCACTTAGTTGATGATT TCAGCAGAGCAGAAAATACCGCTTTTATATCTGGTGATGGAAACAACAAGCCATATGGTATCTTAACATATGCTTCAGAC ATAGAAAATAACACCATAACATCTACAACACTAAATAGTGATATAATTATCAAACTTTATTATTCACTTGATGAATATTT CTCCAGAAAGGCAGCATTCATAATGCACAGAAGTGTACTACAAGAAATTAGATCTTTAAAGTTAGCATCTGGCCAATATA TATGGCATCCAGGACTAACATCAGGAAGTCCTGACACATTAATGGGGTTACCAGTATATCAAACATCCGATATGCCTCAA TTAGACAATAAAACATTACCAACCATAGCACTTGCAGACTTTAAAAATGCATATAAGATAGTAGAAAACCGTTCAATTAA AACATTAAGAGATCCTTTTACAAGCAAACCCTTTGTCAAGTTTTATACAACAAAACGAGTAGGAGGAGCAGTCATTAATA AAAATGCTATAAAATTTTTAACAATAAAATAA
Upstream 100 bases:
>100_bases AGTATAAGTTTCACAGCTCCCTTCAAATTTTCCTATTGTAATATATCTTTCTTACGCTGTGACTTTCCACATAATCAGCA TTCACATCAACGGAGCAAAA
Downstream 100 bases:
>100_bases AACACAGTAGCATTTTTTCTACATCAAAACATTATCTAAATATTTTTTACTAAGAAATACAAAGACCACATAATACCTTT CAATCCTTATATTTAACAAA
Product: HK97 family phage major capsid protein
Products: NA
Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid C; Phage Capsid Family Protein
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTTSMLEIQESLHNLTSSWEEFKNLNEKKLSDISKKSSTYPSILEKLEKTESMLEIQNERLDQLEISSQRPVTHDNKHYN EDYNYKTFTQYLCKGTNLQGQSSVVQPLDESYFIPHNISSYIETNLTKNSVMRQLCSIEKISGDSLDCFIRNNNEKSVNW RTSNNVEDTESPKIDKITINLHELYTQPKITKKLLEDSTIDVASWLINHLVDDFSRAENTAFISGDGNNKPYGILTYASD IENNTITSTTLNSDIIIKLYYSLDEYFSRKAAFIMHRSVLQEIRSLKLASGQYIWHPGLTSGSPDTLMGLPVYQTSDMPQ LDNKTLPTIALADFKNAYKIVENRSIKTLRDPFTSKPFVKFYTTKRVGGAVINKNAIKFLTIK
Sequences:
>Translated_383_residues MTTSMLEIQESLHNLTSSWEEFKNLNEKKLSDISKKSSTYPSILEKLEKTESMLEIQNERLDQLEISSQRPVTHDNKHYN EDYNYKTFTQYLCKGTNLQGQSSVVQPLDESYFIPHNISSYIETNLTKNSVMRQLCSIEKISGDSLDCFIRNNNEKSVNW RTSNNVEDTESPKIDKITINLHELYTQPKITKKLLEDSTIDVASWLINHLVDDFSRAENTAFISGDGNNKPYGILTYASD IENNTITSTTLNSDIIIKLYYSLDEYFSRKAAFIMHRSVLQEIRSLKLASGQYIWHPGLTSGSPDTLMGLPVYQTSDMPQ LDNKTLPTIALADFKNAYKIVENRSIKTLRDPFTSKPFVKFYTTKRVGGAVINKNAIKFLTIK >Mature_382_residues TTSMLEIQESLHNLTSSWEEFKNLNEKKLSDISKKSSTYPSILEKLEKTESMLEIQNERLDQLEISSQRPVTHDNKHYNE DYNYKTFTQYLCKGTNLQGQSSVVQPLDESYFIPHNISSYIETNLTKNSVMRQLCSIEKISGDSLDCFIRNNNEKSVNWR TSNNVEDTESPKIDKITINLHELYTQPKITKKLLEDSTIDVASWLINHLVDDFSRAENTAFISGDGNNKPYGILTYASDI ENNTITSTTLNSDIIIKLYYSLDEYFSRKAAFIMHRSVLQEIRSLKLASGQYIWHPGLTSGSPDTLMGLPVYQTSDMPQL DNKTLPTIALADFKNAYKIVENRSIKTLRDPFTSKPFVKFYTTKRVGGAVINKNAIKFLTIK
Specific function: Unknown
COG id: COG4653
COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43841; Mature: 43710
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSMLEIQESLHNLTSSWEEFKNLNEKKLSDISKKSSTYPSILEKLEKTESMLEIQNER CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LDQLEISSQRPVTHDNKHYNEDYNYKTFTQYLCKGTNLQGQSSVVQPLDESYFIPHNISS HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCHHH YIETNLTKNSVMRQLCSIEKISGDSLDCFIRNNNEKSVNWRTSNNVEDTESPKIDKITIN HHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEE LHELYTQPKITKKLLEDSTIDVASWLINHLVDDFSRAENTAFISGDGNNKPYGILTYASD HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECC IENNTITSTTLNSDIIIKLYYSLDEYFSRKAAFIMHRSVLQEIRSLKLASGQYIWHPGLT CCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC SGSPDTLMGLPVYQTSDMPQLDNKTLPTIALADFKNAYKIVENRSIKTLRDPFTSKPFVK CCCCCCEEECCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCCCCEEE FYTTKRVGGAVINKNAIKFLTIK EEEHHHCCCEEECCCCEEEEEEC >Mature Secondary Structure TTSMLEIQESLHNLTSSWEEFKNLNEKKLSDISKKSSTYPSILEKLEKTESMLEIQNER CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LDQLEISSQRPVTHDNKHYNEDYNYKTFTQYLCKGTNLQGQSSVVQPLDESYFIPHNISS HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCHHH YIETNLTKNSVMRQLCSIEKISGDSLDCFIRNNNEKSVNWRTSNNVEDTESPKIDKITIN HHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEE LHELYTQPKITKKLLEDSTIDVASWLINHLVDDFSRAENTAFISGDGNNKPYGILTYASD HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECC IENNTITSTTLNSDIIIKLYYSLDEYFSRKAAFIMHRSVLQEIRSLKLASGQYIWHPGLT CCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC SGSPDTLMGLPVYQTSDMPQLDNKTLPTIALADFKNAYKIVENRSIKTLRDPFTSKPFVK CCCCCCEEECCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCCCCEEE FYTTKRVGGAVINKNAIKFLTIK EEEHHHCCCEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA