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The map label for this gene is ycfF [C]

Identifier: 88657807

GI number: 88657807

Start: 842543

End: 842893

Strand: Direct

Name: ycfF [C]

Synonym: ECH_0826

Alternate gene names: 88657807

Gene position: 842543-842893 (Clockwise)

Preceding gene: 88658118

Following gene: 88658042

Centisome position: 71.63

GC content: 31.91

Gene sequence:

>351_bases
ATGCAAGATAATACTTCTTATGACAATAACAACGTTTTTGCAAAGATTTTAAGAAAAGAACTTCCATGTAACGTAGTATA
TGAAGATGAGTTTGTATTAGCATTTCATGACATACATCCTCAAGCTCCTATACACATTCTAGTTATTCCCAAAGGCGAGT
ATATATCATTTGATGATTTCAGTGATTCTTCAGCAGACATTAGACATTTTTTTTCTATTGTAAAGAAGATTACCCACCAA
TTCCAATTAGAAAAAACTGGATATAGAATTGTTACAAATCATGGAAAACAAGGAGGACAAATTGTTCCACATTTCCATGT
GCATATTTTAGGCGGAAAACAGCTACCATAA

Upstream 100 bases:

>100_bases
GATGAAATAGCAGAAGATTTATGTCAAGGTCTTAATGAAGGGCCAACACAAGGTAATTCAAACAATATAGGAAAGCATTT
TAGTAATCCAGGAAAAGTAC

Downstream 100 bases:

>100_bases
TAAATCAGCTAATCTACTACTAGTAATGTGTGTACATCATACAAGTACTTACCCATGCAACACTTATTATAAAATCATAA
AAAATTATATAGCTTTACCA

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQDNTSYDNNNVFAKILRKELPCNVVYEDEFVLAFHDIHPQAPIHILVIPKGEYISFDDFSDSSADIRHFFSIVKKITHQ
FQLEKTGYRIVTNHGKQGGQIVPHFHVHILGGKQLP

Sequences:

>Translated_116_residues
MQDNTSYDNNNVFAKILRKELPCNVVYEDEFVLAFHDIHPQAPIHILVIPKGEYISFDDFSDSSADIRHFFSIVKKITHQ
FQLEKTGYRIVTNHGKQGGQIVPHFHVHILGGKQLP
>Mature_116_residues
MQDNTSYDNNNVFAKILRKELPCNVVYEDEFVLAFHDIHPQAPIHILVIPKGEYISFDDFSDSSADIRHFFSIVKKITHQ
FQLEKTGYRIVTNHGKQGGQIVPHFHVHILGGKQLP

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=109, Percent_Identity=46.7889908256881, Blast_Score=98, Evalue=1e-21,
Organism=Homo sapiens, GI14211923, Length=105, Percent_Identity=40.9523809523809, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=39.8148148148148, Blast_Score=86, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=46.2962962962963, Blast_Score=104, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24581222, Length=113, Percent_Identity=41.5929203539823, Blast_Score=100, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28574010, Length=113, Percent_Identity=41.5929203539823, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13341; Mature: 13341

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDNTSYDNNNVFAKILRKELPCNVVYEDEFVLAFHDIHPQAPIHILVIPKGEYISFDDF
CCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCEEEEEEECCCEEEECCC
SDSSADIRHFFSIVKKITHQFQLEKTGYRIVTNHGKQGGQIVPHFHVHILGGKQLP
CCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCEECCEEEEEEECCCCCC
>Mature Secondary Structure
MQDNTSYDNNNVFAKILRKELPCNVVYEDEFVLAFHDIHPQAPIHILVIPKGEYISFDDF
CCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCEEEEEEECCCEEEECCC
SDSSADIRHFFSIVKKITHQFQLEKTGYRIVTNHGKQGGQIVPHFHVHILGGKQLP
CCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]