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The map label for this gene is smf [H]

Identifier: 88657722

GI number: 88657722

Start: 905243

End: 906370

Strand: Direct

Name: smf [H]

Synonym: ECH_0883

Alternate gene names: 88657722

Gene position: 905243-906370 (Clockwise)

Preceding gene: 88658199

Following gene: 88658406

Centisome position: 76.96

GC content: 31.38

Gene sequence:

>1128_bases
ATGAAAATCAATAAAGAATTATCCCACCAAGAACTGATATCATGTCTTAGAGTAATAAGAACACCAAACATAGGTCCATC
AACATTTCATGCATTAATTAAGCTATATAAAACTTGTCAACATATACTGGAAGTTCTACCAAACTTAATAAAAAAATCTA
AAATTAATAATAAAATTCACAACATATGCTCTATTGAAGCAGCAGAACTAGAAATTGAAAATACTACTAAGATTGGTGGA
AAAATAATTACTGTATTTGATGAAGACTACCCAGAAATTTTACGTAATATTCACGATTATCCACCAGTTATAACAGTACT
AGGAGACTCATCACTGTTAAAAGAAAAAACAATAGGAATAGTAGGAAGCAGGAACCCTTCCATCAATGGAAAAAATTTTG
CTTATAAGTTATCATACGAATTAGCTAACTCTGGTTTTGTTATAGCGTCCGGATTAGCAAGAGGAATAGATAAATCTGCA
CATAGTATAATTTACCAACAATTACCAACAATTGCTGTCATGGCCAGCGGAGTCAACATAGTATACCCGCAGGAAAATAT
ACATTTATATAACACCATAGTAGATAAAGGAGGATTAATAATCACGGAATTTCCTTTTTCTACATTACCAAGGGCTCAAT
TATTTCCACAACGTAATCGTATAATTTCTGGATTATCACTTGGAGTAGTAATTGTCGAAGCATCTATACAATCAGGATCA
CTTATTACAGCAAATTTCGCTTTAGAACAAAATAGAGAAGTATTTGCAGTTCCTGGGTCACCACTTGACCATAGGTGTAG
AGGAAGTAACAGTCTAATAAAAAACGGAGCAAAATTAGTAGAATTTACACACGATATCACAGAAAGTTTACAATTTAACA
ATAATAAACCTTACATACAACAATCAATATTCGATAATACAACAAAAAGTGATAATAACCTTTTTGAAATCAATAATGCA
AAAGATACTATTCTGCAATACATAACCCATAGTCCAACCGAAATTGAAGAAATCATTGCGTCTACTAATTTGAACATCAG
TAGTATATTAATAGCCTTAATTGAGCTAGAAGCAGCACAAAAAATAGAAAGATTTCCTAACAATAAAGTAGCTTTAATGC
ACTACTAG

Upstream 100 bases:

>100_bases
ATAGAGTTCTTAACAATAAATACTATTTATTATTACTAATTATTTGATTAATATAAGTTAATATCTTAACTTATATTATT
AGATACAAAAAAAGTTAATT

Downstream 100 bases:

>100_bases
ACTTAAAAATTAATACTTTTTATAAAATTATCTTTTAGTTAATTAAGTCACTTCAATAATTAGACAAGAATAGAAAGATT
CCATAACAATAAAGTAGCTT

Product: putative DNA processing protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKINKELSHQELISCLRVIRTPNIGPSTFHALIKLYKTCQHILEVLPNLIKKSKINNKIHNICSIEAAELEIENTTKIGG
KIITVFDEDYPEILRNIHDYPPVITVLGDSSLLKEKTIGIVGSRNPSINGKNFAYKLSYELANSGFVIASGLARGIDKSA
HSIIYQQLPTIAVMASGVNIVYPQENIHLYNTIVDKGGLIITEFPFSTLPRAQLFPQRNRIISGLSLGVVIVEASIQSGS
LITANFALEQNREVFAVPGSPLDHRCRGSNSLIKNGAKLVEFTHDITESLQFNNNKPYIQQSIFDNTTKSDNNLFEINNA
KDTILQYITHSPTEIEEIIASTNLNISSILIALIELEAAQKIERFPNNKVALMHY

Sequences:

>Translated_375_residues
MKINKELSHQELISCLRVIRTPNIGPSTFHALIKLYKTCQHILEVLPNLIKKSKINNKIHNICSIEAAELEIENTTKIGG
KIITVFDEDYPEILRNIHDYPPVITVLGDSSLLKEKTIGIVGSRNPSINGKNFAYKLSYELANSGFVIASGLARGIDKSA
HSIIYQQLPTIAVMASGVNIVYPQENIHLYNTIVDKGGLIITEFPFSTLPRAQLFPQRNRIISGLSLGVVIVEASIQSGS
LITANFALEQNREVFAVPGSPLDHRCRGSNSLIKNGAKLVEFTHDITESLQFNNNKPYIQQSIFDNTTKSDNNLFEINNA
KDTILQYITHSPTEIEEIIASTNLNISSILIALIELEAAQKIERFPNNKVALMHY
>Mature_375_residues
MKINKELSHQELISCLRVIRTPNIGPSTFHALIKLYKTCQHILEVLPNLIKKSKINNKIHNICSIEAAELEIENTTKIGG
KIITVFDEDYPEILRNIHDYPPVITVLGDSSLLKEKTIGIVGSRNPSINGKNFAYKLSYELANSGFVIASGLARGIDKSA
HSIIYQQLPTIAVMASGVNIVYPQENIHLYNTIVDKGGLIITEFPFSTLPRAQLFPQRNRIISGLSLGVVIVEASIQSGS
LITANFALEQNREVFAVPGSPLDHRCRGSNSLIKNGAKLVEFTHDITESLQFNNNKPYIQQSIFDNTTKSDNNLFEINNA
KDTILQYITHSPTEIEEIIASTNLNISSILIALIELEAAQKIERFPNNKVALMHY

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=293, Percent_Identity=36.518771331058, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41701; Mature: 41701

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKELSHQELISCLRVIRTPNIGPSTFHALIKLYKTCQHILEVLPNLIKKSKINNKIH
CCCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NICSIEAAELEIENTTKIGGKIITVFDEDYPEILRNIHDYPPVITVLGDSSLLKEKTIGI
HHHCCEEHEEEECCCEECCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCHHHHHHHEEE
VGSRNPSINGKNFAYKLSYELANSGFVIASGLARGIDKSAHSIIYQQLPTIAVMASGVNI
EECCCCCCCCCCEEEEEEEEECCCCEEEEHHHHHHCCHHHHHHHHHHCCHHEEEECCCEE
VYPQENIHLYNTIVDKGGLIITEFPFSTLPRAQLFPQRNRIISGLSLGVVIVEASIQSGS
EECCCCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCHHHHHCCCEEEEEEEEECCCCCC
LITANFALEQNREVFAVPGSPLDHRCRGSNSLIKNGAKLVEFTHDITESLQFNNNKPYIQ
EEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHH
QSIFDNTTKSDNNLFEINNAKDTILQYITHSPTEIEEIIASTNLNISSILIALIELEAAQ
HHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KIERFPNNKVALMHY
HHHHCCCCCEEEEEC
>Mature Secondary Structure
MKINKELSHQELISCLRVIRTPNIGPSTFHALIKLYKTCQHILEVLPNLIKKSKINNKIH
CCCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NICSIEAAELEIENTTKIGGKIITVFDEDYPEILRNIHDYPPVITVLGDSSLLKEKTIGI
HHHCCEEHEEEECCCEECCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCHHHHHHHEEE
VGSRNPSINGKNFAYKLSYELANSGFVIASGLARGIDKSAHSIIYQQLPTIAVMASGVNI
EECCCCCCCCCCEEEEEEEEECCCCEEEEHHHHHHCCHHHHHHHHHHCCHHEEEECCCEE
VYPQENIHLYNTIVDKGGLIITEFPFSTLPRAQLFPQRNRIISGLSLGVVIVEASIQSGS
EECCCCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCHHHHHCCCEEEEEEEEECCCCCC
LITANFALEQNREVFAVPGSPLDHRCRGSNSLIKNGAKLVEFTHDITESLQFNNNKPYIQ
EEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHH
QSIFDNTTKSDNNLFEINNAKDTILQYITHSPTEIEEIIASTNLNISSILIALIELEAAQ
HHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KIERFPNNKVALMHY
HHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]