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The map label for this gene is bepC [H]

Identifier: 88657721

GI number: 88657721

Start: 1044549

End: 1045820

Strand: Direct

Name: bepC [H]

Synonym: ECH_1020

Alternate gene names: 88657721

Gene position: 1044549-1045820 (Clockwise)

Preceding gene: 88658529

Following gene: 88658363

Centisome position: 88.8

GC content: 31.29

Gene sequence:

>1272_bases
ATGATAAGCAAATTTAATATACGTAAGGTTTGTTATACATTGATATTGATATCTATGTCAATTATACCTAATAACAGTTA
TTGTACTAACTTAGATGAAGCTTTACAGGCTGCATTATCAAATAACCCCAACATAAAAGCAAAATTCTATCATTCCTTAG
GGAATAAACAAAAAATTAAATTGAATAGCATATCAAAGTTTTTACCATCAATTGCATACTCCGTGCAGGTACATCAGCCA
GAATTATCTCTAACCAACAATAGTAATAGAACTATGAGCCTCATAGTTACTCAACAGCTATTCAATGGAGGAGCTGATGC
CGCTGCTTTTCAACAATCAAAATACTTAACAAATATAGAAGATATTGATTTTTCACTAGAGAAACAAAATGTTATACTTA
ATACAGTAAAAGCTTACATGAAGGTTTTAACAACAGCTGAGGTATATAAGTTAACACAGCATACTAAAAAAGTATTAGCA
GAACATTTAACAGCCACACAAAAACGTTTTTCTTTAGGAGAAGTTACTAAAACAGATGTCTCACTAGCTACTGCTAGGTT
ATCATCAGCTACATCAGAATTAATCAAAGCTCACGGAGAAATGAAAGTTGCAGAAGCTAACTACATTCACATAACAGGAG
AAATACCAACAGATTTACAAAATCCTGCTATACCAGCAATACCATCATCTGTAGAAGAAGCTTTAGAAATAGCTCAAAAA
AATAACCTTTCTCTACAAGCATCTCACAACGGATATAAAGCAGCTAAGCAGGGTATCTTAATGGCAATTGCACATTTACT
TCCTTCTATTAGCATATCATCAATAAATTCTTATACTTACTCTAATATTCCTAACACAAATCCTAAAAAAATTGACAATC
TATTTGAAATAAAAATGTCATTACCTATATTCCAACAAGGATTAAACATCGCTGCAATTGCACAATCAAAACTTGCAGCA
CAACACAAGATGTATTCACATTATGAAGTGTTAAACACGATTAAAGAGTCTGTTATTTCAAATTGGGAAAATATTTTCAC
TACAAATTCCATGCTACAAGCAGCTCAAGATTCTGTGAGATATTCAGAAGTAGCATTATTCGGAATAAAACAGGAAGCAG
AGTTAAATTTAAGAACAGTTCTAGATGTATTAGATGCAGAGCAAGAATTGCTAAAAGCAAAAGTCAATCTTGTTAATGTA
CAAAGTAATGTCGTGATAAGTATATACAACCTACTTGCATTAATAGGACAACTAAACATTAATTATATTTAA

Upstream 100 bases:

>100_bases
ATAACATAGAATTGAATTAATCAAACTTCACACTTAATTCTTGCTAATCAAAATTAATTACAGTTTAATCATTGCTAGTA
TTACTAGTTGGTAACATTTA

Downstream 100 bases:

>100_bases
CATAGAAATTTATGAGTAATACTAACAATTTTCAATCTATTAAAGAAACAATTGCAAATATTAGAAAAGCCATGTCTAGC
AGCGATAATACAGATCCTGT

Product: putative outer membrane protein TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MISKFNIRKVCYTLILISMSIIPNNSYCTNLDEALQAALSNNPNIKAKFYHSLGNKQKIKLNSISKFLPSIAYSVQVHQP
ELSLTNNSNRTMSLIVTQQLFNGGADAAAFQQSKYLTNIEDIDFSLEKQNVILNTVKAYMKVLTTAEVYKLTQHTKKVLA
EHLTATQKRFSLGEVTKTDVSLATARLSSATSELIKAHGEMKVAEANYIHITGEIPTDLQNPAIPAIPSSVEEALEIAQK
NNLSLQASHNGYKAAKQGILMAIAHLLPSISISSINSYTYSNIPNTNPKKIDNLFEIKMSLPIFQQGLNIAAIAQSKLAA
QHKMYSHYEVLNTIKESVISNWENIFTTNSMLQAAQDSVRYSEVALFGIKQEAELNLRTVLDVLDAEQELLKAKVNLVNV
QSNVVISIYNLLALIGQLNINYI

Sequences:

>Translated_423_residues
MISKFNIRKVCYTLILISMSIIPNNSYCTNLDEALQAALSNNPNIKAKFYHSLGNKQKIKLNSISKFLPSIAYSVQVHQP
ELSLTNNSNRTMSLIVTQQLFNGGADAAAFQQSKYLTNIEDIDFSLEKQNVILNTVKAYMKVLTTAEVYKLTQHTKKVLA
EHLTATQKRFSLGEVTKTDVSLATARLSSATSELIKAHGEMKVAEANYIHITGEIPTDLQNPAIPAIPSSVEEALEIAQK
NNLSLQASHNGYKAAKQGILMAIAHLLPSISISSINSYTYSNIPNTNPKKIDNLFEIKMSLPIFQQGLNIAAIAQSKLAA
QHKMYSHYEVLNTIKESVISNWENIFTTNSMLQAAQDSVRYSEVALFGIKQEAELNLRTVLDVLDAEQELLKAKVNLVNV
QSNVVISIYNLLALIGQLNINYI
>Mature_423_residues
MISKFNIRKVCYTLILISMSIIPNNSYCTNLDEALQAALSNNPNIKAKFYHSLGNKQKIKLNSISKFLPSIAYSVQVHQP
ELSLTNNSNRTMSLIVTQQLFNGGADAAAFQQSKYLTNIEDIDFSLEKQNVILNTVKAYMKVLTTAEVYKLTQHTKKVLA
EHLTATQKRFSLGEVTKTDVSLATARLSSATSELIKAHGEMKVAEANYIHITGEIPTDLQNPAIPAIPSSVEEALEIAQK
NNLSLQASHNGYKAAKQGILMAIAHLLPSISISSINSYTYSNIPNTNPKKIDNLFEIKMSLPIFQQGLNIAAIAQSKLAA
QHKMYSHYEVLNTIKESVISNWENIFTTNSMLQAAQDSVRYSEVALFGIKQEAELNLRTVLDVLDAEQELLKAKVNLVNV
QSNVVISIYNLLALIGQLNINYI

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=358, Percent_Identity=28.2122905027933, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 46860; Mature: 46860

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKFNIRKVCYTLILISMSIIPNNSYCTNLDEALQAALSNNPNIKAKFYHSLGNKQKIK
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEE
LNSISKFLPSIAYSVQVHQPELSLTNNSNRTMSLIVTQQLFNGGADAAAFQQSKYLTNIE
HHHHHHHHHHHEEEEEEECCCEEEECCCCCEEEEEEEHHHHCCCCCHHHHHHHHHCCCHH
DIDFSLEKQNVILNTVKAYMKVLTTAEVYKLTQHTKKVLAEHLTATQKRFSLGEVTKTDV
HCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLATARLSSATSELIKAHGEMKVAEANYIHITGEIPTDLQNPAIPAIPSSVEEALEIAQK
HHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
NNLSLQASHNGYKAAKQGILMAIAHLLPSISISSINSYTYSNIPNTNPKKIDNLFEIKMS
CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHCCCCEEECCCCCCCHHHHHHHHHHHCC
LPIFQQGLNIAAIAQSKLAAQHKMYSHYEVLNTIKESVISNWENIFTTNSMLQAAQDSVR
CHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSEVALFGIKQEAELNLRTVLDVLDAEQELLKAKVNLVNVQSNVVISIYNLLALIGQLNI
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCC
NYI
CCC
>Mature Secondary Structure
MISKFNIRKVCYTLILISMSIIPNNSYCTNLDEALQAALSNNPNIKAKFYHSLGNKQKIK
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEE
LNSISKFLPSIAYSVQVHQPELSLTNNSNRTMSLIVTQQLFNGGADAAAFQQSKYLTNIE
HHHHHHHHHHHEEEEEEECCCEEEECCCCCEEEEEEEHHHHCCCCCHHHHHHHHHCCCHH
DIDFSLEKQNVILNTVKAYMKVLTTAEVYKLTQHTKKVLAEHLTATQKRFSLGEVTKTDV
HCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLATARLSSATSELIKAHGEMKVAEANYIHITGEIPTDLQNPAIPAIPSSVEEALEIAQK
HHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
NNLSLQASHNGYKAAKQGILMAIAHLLPSISISSINSYTYSNIPNTNPKKIDNLFEIKMS
CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHCCCCEEECCCCCCCHHHHHHHHHHHCC
LPIFQQGLNIAAIAQSKLAAQHKMYSHYEVLNTIKESVISNWENIFTTNSMLQAAQDSVR
CHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSEVALFGIKQEAELNLRTVLDVLDAEQELLKAKVNLVNVQSNVVISIYNLLALIGQLNI
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCC
NYI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]