Definition Ehrlichia chaffeensis str. Arkansas, complete genome.
Accession NC_007799
Length 1,176,248

Click here to switch to the map view.

The map label for this gene is 88657650

Identifier: 88657650

GI number: 88657650

Start: 683310

End: 684110

Strand: Direct

Name: 88657650

Synonym: ECH_0670

Alternate gene names: NA

Gene position: 683310-684110 (Clockwise)

Preceding gene: 88658561

Following gene: 88658014

Centisome position: 58.09

GC content: 29.71

Gene sequence:

>801_bases
ATGTTTCTTTTTAAAAAAGCAACATATAAAACCAAATATTATATAGCACTTTGTGCTAATACTATATACTTTGGGGTGTT
CTTATTCGCAATTTTTATACAATTAATCAGATTTCCTTCAAAGCTTAGCAATAAAGACCTACTGTTAATTAATGTGCTAA
TGGTTTTATCAGCACGTATTATGCTATGTTTATTATCATCCTATGAATTAACATGCACACATTACACAAATGATAACGAT
TCCTTATTATATTATAAAAAAGCAGCATACGCAGCTGAAGTAATTAGTACTATAATCGCAATAATAATACAAGTTATTGC
AGTATCTCAAGTAGCAGCAGGTAATTTAGAGATAGTATCAAGTAAAAAAACAACGATTCATACCAAAGGAGCTGTAGACT
TTGCTTGTATATTAATCAAGTTATTAATAGCATCACCACTGCTAGTATATTTTAATTATCGTAGAATGAAAGATGATAAA
TGTGCAGCATACAAAAAAGATGCAGAAATTTTATTTTATCTTTCTATAACATCACTAGTTATAAGTTTTATAGCATTCAT
CGGAAAAATCATTAATGTTTTAGAACAAACACAATCCTTTGCACTCTTCAATACAGAAAATCACAGCAATAATGGACCTA
CTAACTTCCCTCTTGGCCCAATAATTAGAATATCATGTATTGCAGCTAGCATAATCATATTGACAGTAATACTCAGTATA
GAATCATCCATTAGCTCTAAAATGTCAGATACCACAATAGAATACCAAGGACTCTCTAATGCTAATGAATTGAGTGGCTA
A

Upstream 100 bases:

>100_bases
GATGAAAGTAAATATATTACAGGCCAAACTTTACACATAAATGGTGGAATGTTAATGTATTAATGTGGTACAATGCTAAT
ACACTAATTTATAAAGACAC

Downstream 100 bases:

>100_bases
GGAGGGATTCGAACCCGCGACCGAGAGATTATGATTCTCCTACTCTACCACTGAGCTACTTAGCCCCTAGGTAATCATAT
AACACACGATCTACATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MFLFKKATYKTKYYIALCANTIYFGVFLFAIFIQLIRFPSKLSNKDLLLINVLMVLSARIMLCLLSSYELTCTHYTNDND
SLLYYKKAAYAAEVISTIIAIIIQVIAVSQVAAGNLEIVSSKKTTIHTKGAVDFACILIKLLIASPLLVYFNYRRMKDDK
CAAYKKDAEILFYLSITSLVISFIAFIGKIINVLEQTQSFALFNTENHSNNGPTNFPLGPIIRISCIAASIIILTVILSI
ESSISSKMSDTTIEYQGLSNANELSG

Sequences:

>Translated_266_residues
MFLFKKATYKTKYYIALCANTIYFGVFLFAIFIQLIRFPSKLSNKDLLLINVLMVLSARIMLCLLSSYELTCTHYTNDND
SLLYYKKAAYAAEVISTIIAIIIQVIAVSQVAAGNLEIVSSKKTTIHTKGAVDFACILIKLLIASPLLVYFNYRRMKDDK
CAAYKKDAEILFYLSITSLVISFIAFIGKIINVLEQTQSFALFNTENHSNNGPTNFPLGPIIRISCIAASIIILTVILSI
ESSISSKMSDTTIEYQGLSNANELSG
>Mature_266_residues
MFLFKKATYKTKYYIALCANTIYFGVFLFAIFIQLIRFPSKLSNKDLLLINVLMVLSARIMLCLLSSYELTCTHYTNDND
SLLYYKKAAYAAEVISTIIAIIIQVIAVSQVAAGNLEIVSSKKTTIHTKGAVDFACILIKLLIASPLLVYFNYRRMKDDK
CAAYKKDAEILFYLSITSLVISFIAFIGKIINVLEQTQSFALFNTENHSNNGPTNFPLGPIIRISCIAASIIILTVILSI
ESSISSKMSDTTIEYQGLSNANELSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29575; Mature: 29575

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFKKATYKTKYYIALCANTIYFGVFLFAIFIQLIRFPSKLSNKDLLLINVLMVLSARI
CCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHH
MLCLLSSYELTCTHYTNDNDSLLYYKKAAYAAEVISTIIAIIIQVIAVSQVAAGNLEIVS
HHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
SKKTTIHTKGAVDFACILIKLLIASPLLVYFNYRRMKDDKCAAYKKDAEILFYLSITSLV
CCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHH
ISFIAFIGKIINVLEQTQSFALFNTENHSNNGPTNFPLGPIIRISCIAASIIILTVILSI
HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESSISSKMSDTTIEYQGLSNANELSG
HHHHHHHHCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MFLFKKATYKTKYYIALCANTIYFGVFLFAIFIQLIRFPSKLSNKDLLLINVLMVLSARI
CCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHH
MLCLLSSYELTCTHYTNDNDSLLYYKKAAYAAEVISTIIAIIIQVIAVSQVAAGNLEIVS
HHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
SKKTTIHTKGAVDFACILIKLLIASPLLVYFNYRRMKDDKCAAYKKDAEILFYLSITSLV
CCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHH
ISFIAFIGKIINVLEQTQSFALFNTENHSNNGPTNFPLGPIIRISCIAASIIILTVILSI
HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESSISSKMSDTTIEYQGLSNANELSG
HHHHHHHHCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA