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The map label for this gene is rpmJ [H]

Identifier: 88607865

GI number: 88607865

Start: 533942

End: 534109

Strand: Direct

Name: rpmJ [H]

Synonym: APH_0508

Alternate gene names: 88607865

Gene position: 533942-534109 (Clockwise)

Preceding gene: 88607309

Following gene: 88606791

Centisome position: 36.29

GC content: 47.62

Gene sequence:

>168_bases
TTGAGATACTCTGCGTTTGTTGTAGGCGTGGGGTATGTTGTGAAAGTTATGGGGTCTTTGAAGTCTGCTAAGAGCAGAGA
TAGGGACTGTAAGATAGTGCGCCGGAAGGGCCGCGTGTACGTAATCAACAAGAAAAAGCCAAGATTTAAGGCTCGTCAGG
GGTACTAG

Upstream 100 bases:

>100_bases
TTTGTTATGGTGCCATTTAACTTGATGTGCCAGTATGGTATCATTGGCAATTTATTGGTGAGAGAAGGCTAGATTTTCTC
TTGACGATCTATAGTAAATA

Downstream 100 bases:

>100_bases
TTCGTAGTAAGTGTTCTGCGGCGTGGTCTCTCGGTGGGCGTTGCACGTGCGTATAGTATGTTGTTGGCTATGGCTTCGCA
CCTGTCTTGAGTGTCGGTGA

Product: ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MRYSAFVVGVGYVVKVMGSLKSAKSRDRDCKIVRRKGRVYVINKKKPRFKARQGY

Sequences:

>Translated_55_residues
MRYSAFVVGVGYVVKVMGSLKSAKSRDRDCKIVRRKGRVYVINKKKPRFKARQGY
>Mature_55_residues
MRYSAFVVGVGYVVKVMGSLKSAKSRDRDCKIVRRKGRVYVINKKKPRFKARQGY

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 6382; Mature: 6382

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSAFVVGVGYVVKVMGSLKSAKSRDRDCKIVRRKGRVYVINKKKPRFKARQGY
CCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRYSAFVVGVGYVVKVMGSLKSAKSRDRDCKIVRRKGRVYVINKKKPRFKARQGY
CCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA