Click here to switch to the map view.

The map label for this gene is 88607739

Identifier: 88607739

GI number: 88607739

Start: 188371

End: 188637

Strand: Direct

Name: 88607739

Synonym: APH_0188

Alternate gene names: NA

Gene position: 188371-188637 (Clockwise)

Preceding gene: 88607266

Following gene: 88607454

Centisome position: 12.8

GC content: 41.95

Gene sequence:

>267_bases
ATGTCATGCTGTTCGGAGGATATTATGCTTCCTCAATACTTTTGCGCGCATCATGGCAAGAGCAATGGATTTTGCAGGTA
TACGCAGGCTTGTAGAGATGATCCATCCACGCGTATTAAGCACTACATCTCTGTTGTTTTCTCTCAAAACCTTTTGAGTT
ACGGAATGTCATGGGTAAAGCCTCCCTACAAGCATACTATGTTTTTAAATGAGCAGCTGCGTGTTAGTGCTGATGGTTAC
CCAACATATGCAGTTATTACAGTGTAA

Upstream 100 bases:

>100_bases
CATGAGAGCAATGGGAAAATTTTCTACTACATTGAAGATATGAGAACAGCGGTAAAATCGCCATAGTAGCTTTAATGCCA
TGAGAACAGTTTAAATTATA

Downstream 100 bases:

>100_bases
AATGAAGCAACAGAGCTGCGACATCGCAGGATGGACATGCATAAGAAATAGGCGGGGCAGGGAGGTGTTCACTGTGATTA
CTGAAATAGTAGCGTTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSCCSEDIMLPQYFCAHHGKSNGFCRYTQACRDDPSTRIKHYISVVFSQNLLSYGMSWVKPPYKHTMFLNEQLRVSADGY
PTYAVITV

Sequences:

>Translated_88_residues
MSCCSEDIMLPQYFCAHHGKSNGFCRYTQACRDDPSTRIKHYISVVFSQNLLSYGMSWVKPPYKHTMFLNEQLRVSADGY
PTYAVITV
>Mature_87_residues
SCCSEDIMLPQYFCAHHGKSNGFCRYTQACRDDPSTRIKHYISVVFSQNLLSYGMSWVKPPYKHTMFLNEQLRVSADGYP
TYAVITV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10136; Mature: 10005

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCCSEDIMLPQYFCAHHGKSNGFCRYTQACRDDPSTRIKHYISVVFSQNLLSYGMSWVK
CCCCCCCCCCHHHHHHHCCCCCCCEEECHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
PPYKHTMFLNEQLRVSADGYPTYAVITV
CCCHHEEEECCCEEEECCCCCCEEEEEC
>Mature Secondary Structure 
SCCSEDIMLPQYFCAHHGKSNGFCRYTQACRDDPSTRIKHYISVVFSQNLLSYGMSWVK
CCCCCCCCCHHHHHHHCCCCCCCEEECHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
PPYKHTMFLNEQLRVSADGYPTYAVITV
CCCHHEEEECCCEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA