| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607735
Identifier: 88607735
GI number: 88607735
Start: 106210
End: 107586
Strand: Direct
Name: 88607735
Synonym: APH_0103
Alternate gene names: NA
Gene position: 106210-107586 (Clockwise)
Preceding gene: 88606846
Following gene: 88607343
Centisome position: 7.22
GC content: 46.33
Gene sequence:
>1377_bases ATGTCGGGTCGTGATGTGTGGCCCATAGTGGAAGGTGGCAAGGGAATTAGTGTCAGTGATGGTAGGAGTTCGGGGGCGTT TGCAGCCGCAGACGCTATTGGAACGTTTTCTGGTGCTAATCCTGGGTTGATAGATGAAAATGGTGAATATGTTCCCTTGG TGTATAAGGGCAAGACCAGACTTGAACGTAATAGAGAGCTTATAGAATACAGTATAAAAGCTGCCATAAGCCAGGCACGT ATAGCTCATGATATATCTAAGGGGCGCGGTAGAATACATATGAACGTCCTGTGGGAGATGGGGAACGTTGAGGAAGTATT GCACGGGGTGCTAGGCGCCACTCAAGGCATGATACACGGTATAACTTGTGGGGCTGGGATGCCTTATAGGCTGGCTGAGG TAGCGCAGCAATATGGTGTATACTACTATCCGATAGTGTCATCTGCACGAGCTTTTAGGATTTTATGGAATCGCTCTTAC CGTAAATTTCCGCGAGATTTATTGGGTGGAGTTGTATACGAAGATCCTTGGCTAGCGGGGGGGCATAATGGTCTTAGCAA CAGTGAGGATCCTAAGGTTCCGCAGTCGCCATTTGAGAGGGTGGCTGAGATTAGGGCGTTTATGAATGAAGTTGGCATGT CCGACATTGCTGTCATAATGGCTGGTGGGGTATGGCATTTGAAGGAGTGGGAATCCTGGCTCGATAATGATCGCATAGGT CTAGTAGCGTTCCAGTTTGGAACACGTCCTTTGGTAACGGCAGAGAGTCCTATATCTACATCTTGGAAAAAGAAACTCCT ATCTCTCAAGACGGGTGATGTGTTTTTAAATAGGTTTAGCCCTACGGGGTTTTATTCTTCAGCAGTGAAAAACGAGTTCA TATGTGAGCTACAGCGAAGAAGCGAACGTCAGGTGCCTTTTAGTGAGGAGTGTGTGGGTGACTTTGATACGGAAGTTACG TTTGGGGCTAGAGGCCGCAAGGTATACGTAAGGGCGGCTGATAAGGAGAGAGTAGACGCATGGATGGCATCTGGGTACAG TACGCTTATGAAGACGCCAGACAATACTGCGATTTTTGTTACAGAAGAAAAAGCGCGTGAAATTCGTGCAGATCAGATAG CCTGCATGGGGTGTTTAAGTCACTGTAAGTTTAGTAACTGGAAGGACCACGATGACTATAACACCGGGCAGAAGCCGGAT CCTAGAAGTTTCTGTATTCAGAAGACTTTGCAAAATATTGCTTATGGTGGGGATTGTGAAAGAGAGCTAATGTTTTCTGG CCATAATGCCTACAGGTTTGGTAGCGATGAATTTTATAGTAATGGTAACATTCCTACGGTTGCAGAGTTAGTGAATAGAA TCTTGACGGGATACTAG
Upstream 100 bases:
>100_bases ACAGGTCGTGGTCCTGTGGTTGAAAAGCCCACGAATTATTAGGATACTAGTTAGTTAAGGGGGGATTGCGTTTTTGCTTA AAGGAATTAGAAAAATTCAT
Downstream 100 bases:
>100_bases TTCTCGCGAGCAAGGCTTGTAATTTCTTTTGTAGGCAGGCGCGAGTTCCATGCTATGGACGTAAATGTTGGGCTTCCTGG GTTTGTCATGTCAATCAATT
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Dioxygenase; 2-Nitropropane Dioxygenase Npd; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSGRDVWPIVEGGKGISVSDGRSSGAFAAADAIGTFSGANPGLIDENGEYVPLVYKGKTRLERNRELIEYSIKAAISQAR IAHDISKGRGRIHMNVLWEMGNVEEVLHGVLGATQGMIHGITCGAGMPYRLAEVAQQYGVYYYPIVSSARAFRILWNRSY RKFPRDLLGGVVYEDPWLAGGHNGLSNSEDPKVPQSPFERVAEIRAFMNEVGMSDIAVIMAGGVWHLKEWESWLDNDRIG LVAFQFGTRPLVTAESPISTSWKKKLLSLKTGDVFLNRFSPTGFYSSAVKNEFICELQRRSERQVPFSEECVGDFDTEVT FGARGRKVYVRAADKERVDAWMASGYSTLMKTPDNTAIFVTEEKAREIRADQIACMGCLSHCKFSNWKDHDDYNTGQKPD PRSFCIQKTLQNIAYGGDCERELMFSGHNAYRFGSDEFYSNGNIPTVAELVNRILTGY
Sequences:
>Translated_458_residues MSGRDVWPIVEGGKGISVSDGRSSGAFAAADAIGTFSGANPGLIDENGEYVPLVYKGKTRLERNRELIEYSIKAAISQAR IAHDISKGRGRIHMNVLWEMGNVEEVLHGVLGATQGMIHGITCGAGMPYRLAEVAQQYGVYYYPIVSSARAFRILWNRSY RKFPRDLLGGVVYEDPWLAGGHNGLSNSEDPKVPQSPFERVAEIRAFMNEVGMSDIAVIMAGGVWHLKEWESWLDNDRIG LVAFQFGTRPLVTAESPISTSWKKKLLSLKTGDVFLNRFSPTGFYSSAVKNEFICELQRRSERQVPFSEECVGDFDTEVT FGARGRKVYVRAADKERVDAWMASGYSTLMKTPDNTAIFVTEEKAREIRADQIACMGCLSHCKFSNWKDHDDYNTGQKPD PRSFCIQKTLQNIAYGGDCERELMFSGHNAYRFGSDEFYSNGNIPTVAELVNRILTGY >Mature_457_residues SGRDVWPIVEGGKGISVSDGRSSGAFAAADAIGTFSGANPGLIDENGEYVPLVYKGKTRLERNRELIEYSIKAAISQARI AHDISKGRGRIHMNVLWEMGNVEEVLHGVLGATQGMIHGITCGAGMPYRLAEVAQQYGVYYYPIVSSARAFRILWNRSYR KFPRDLLGGVVYEDPWLAGGHNGLSNSEDPKVPQSPFERVAEIRAFMNEVGMSDIAVIMAGGVWHLKEWESWLDNDRIGL VAFQFGTRPLVTAESPISTSWKKKLLSLKTGDVFLNRFSPTGFYSSAVKNEFICELQRRSERQVPFSEECVGDFDTEVTF GARGRKVYVRAADKERVDAWMASGYSTLMKTPDNTAIFVTEEKAREIRADQIACMGCLSHCKFSNWKDHDDYNTGQKPDP RSFCIQKTLQNIAYGGDCERELMFSGHNAYRFGSDEFYSNGNIPTVAELVNRILTGY
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51097; Mature: 50966
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRDVWPIVEGGKGISVSDGRSSGAFAAADAIGTFSGANPGLIDENGEYVPLVYKGKTR CCCCCCCEEEECCCCCEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHH LERNRELIEYSIKAAISQARIAHDISKGRGRIHMNVLWEMGNVEEVLHGVLGATQGMIHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCHHEE ITCGAGMPYRLAEVAQQYGVYYYPIVSSARAFRILWNRSYRKFPRDLLGGVVYEDPWLAG EECCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCHHHCCHHHHCCCEECCCCCCC GHNGLSNSEDPKVPQSPFERVAEIRAFMNEVGMSDIAVIMAGGVWHLKEWESWLDNDRIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHCCCEEEHHHHHHHHCCCCEE LVAFQFGTRPLVTAESPISTSWKKKLLSLKTGDVFLNRFSPTGFYSSAVKNEFICELQRR EEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH SERQVPFSEECVGDFDTEVTFGARGRKVYVRAADKERVDAWMASGYSTLMKTPDNTAIFV HCCCCCCCHHHCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHCCCCCCEEEE TEEKAREIRADQIACMGCLSHCKFSNWKDHDDYNTGQKPDPRSFCIQKTLQNIAYGGDCE ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC RELMFSGHNAYRFGSDEFYSNGNIPTVAELVNRILTGY HHHHCCCCCCEECCCCHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SGRDVWPIVEGGKGISVSDGRSSGAFAAADAIGTFSGANPGLIDENGEYVPLVYKGKTR CCCCCCEEEECCCCCEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHH LERNRELIEYSIKAAISQARIAHDISKGRGRIHMNVLWEMGNVEEVLHGVLGATQGMIHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCHHEE ITCGAGMPYRLAEVAQQYGVYYYPIVSSARAFRILWNRSYRKFPRDLLGGVVYEDPWLAG EECCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCHHHCCHHHHCCCEECCCCCCC GHNGLSNSEDPKVPQSPFERVAEIRAFMNEVGMSDIAVIMAGGVWHLKEWESWLDNDRIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHCCCEEEHHHHHHHHCCCCEE LVAFQFGTRPLVTAESPISTSWKKKLLSLKTGDVFLNRFSPTGFYSSAVKNEFICELQRR EEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH SERQVPFSEECVGDFDTEVTFGARGRKVYVRAADKERVDAWMASGYSTLMKTPDNTAIFV HCCCCCCCHHHCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHCCCCCCEEEE TEEKAREIRADQIACMGCLSHCKFSNWKDHDDYNTGQKPDPRSFCIQKTLQNIAYGGDCE ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC RELMFSGHNAYRFGSDEFYSNGNIPTVAELVNRILTGY HHHHCCCCCCEECCCCHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA