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The map label for this gene is rmuC [H]

Identifier: 88607728

GI number: 88607728

Start: 443254

End: 444489

Strand: Direct

Name: rmuC [H]

Synonym: APH_0428

Alternate gene names: 88607728

Gene position: 443254-444489 (Clockwise)

Preceding gene: 88607547

Following gene: 88606857

Centisome position: 30.13

GC content: 40.29

Gene sequence:

>1236_bases
GTGGCAGAAAGAAGCTACTATGACGTTGTAATCGAAAAGGCTGGATTAGAGGAAAGATTGCGGGAAAATTTAGAGGAAAA
CGCGGGGTTAAAGCAGAAAATTCAAAATTTACATCTAGAACTCCAAGAAGCGAGGGATAAAGCTCTGGTTTTGGATATTG
AGAAGAAAAATCTCGAGAGAACGAATATGCAGTTTGATGCGTTTCTCAAGTCAGTCGATGAGCAGACGAAGCTCCATTTT
GAAAATCTAGCTAATAAAATCTTTGATGAAAAAATGAATAAATTCAGCAAAATGTCACGCGAAGGGTTGCATTACCTGTT
AGAGCCAGTCAAAGAGAATATGCAGATTTTAAAAAAGGAATTAGAAGAAGCATTTGTGCGTCAGGGAAAGGAGCAATTTT
CTCTTAAGAACGAAATTCAGCGTATAGTTCTTGCAAATGAGAGAATTACTTTACAGGCAGAAAATCTGGCAAGTGCGCTT
AAGGGGAATAATAAGTTGCAGGGTAGCTGGGGAGAAGTAATTCTAGAAAAGGTTTTAGAAGATTCCGGGTTACGACGAGA
TCAAGATTATAAAATGCACAGTGCTGGGATGAGCTTAACAGGCATCACAGGAGGAAAGCAGTATCCTGACGTTGTTGTAC
TACTCCCGGAAGATAAACACATAGTTGTGGATTCGAAAGTGTCTCTAGTACACTATGAGAGGTATTGTTCAGAAAAGCAG
GATGAAAATCTCAGATTGGCGCACCTGAAGCAATTTGTGCATTCGGTAAGATCTCATGTGAATGATCTGGCAGGGAAGAG
ATATACCGACATAGATAGCCTTAATGCGCCTGATTTTGTACTAATGTTCATTCCGATAGAAAGTGCGTATTTTTTAATGG
TTAGAGCTGATACAGAATTGCACGGATATGCTTGGTGTAAGAAGGTGGTTATAGTGTGCCCATCCACGTTGCTTGCGACT
TTGAGGACTATAGAATCTTTGTGGAGGCTTGAGAAGCAAAATCGCAACACACTGGAGATTGCCCGTCAAGGTGGGGCATT
ATACGATAAAATAGCCGGTTTTATTCAAGATATGCAAAAGCTCGGCAAGCAGCTCGATGTTGCAGGGTGTGTGTATAGAG
ATGCCATGAAAAAGCTTTCTGAAGGGCATGGAAATATTTTATCCAGGACTAAAAATTTAAAAAACTTGGGGGTAAAAGCT
TCAAAAAGCTTAGAAATAGAGGCGGTGGACGGTTAA

Upstream 100 bases:

>100_bases
ATTTATGATTCTGAATACAACTTGGCAGATCGTATCTGCTATGGGGGTAGAGGCGATTTGTGTTTTTTTTATCACATACT
TTATCTCTACTAAAGGAAGG

Downstream 100 bases:

>100_bases
AAAGCATGTGCATAATCACATATAAACCGCAGATGCTTGATAGGTTGACGCTTTTAGCGTGCTGAGGGGTTTTCCGTACG
TTTGGAAATTACTAAAAGCA

Product: putative DNA recombination protein RmuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MAERSYYDVVIEKAGLEERLRENLEENAGLKQKIQNLHLELQEARDKALVLDIEKKNLERTNMQFDAFLKSVDEQTKLHF
ENLANKIFDEKMNKFSKMSREGLHYLLEPVKENMQILKKELEEAFVRQGKEQFSLKNEIQRIVLANERITLQAENLASAL
KGNNKLQGSWGEVILEKVLEDSGLRRDQDYKMHSAGMSLTGITGGKQYPDVVVLLPEDKHIVVDSKVSLVHYERYCSEKQ
DENLRLAHLKQFVHSVRSHVNDLAGKRYTDIDSLNAPDFVLMFIPIESAYFLMVRADTELHGYAWCKKVVIVCPSTLLAT
LRTIESLWRLEKQNRNTLEIARQGGALYDKIAGFIQDMQKLGKQLDVAGCVYRDAMKKLSEGHGNILSRTKNLKNLGVKA
SKSLEIEAVDG

Sequences:

>Translated_411_residues
MAERSYYDVVIEKAGLEERLRENLEENAGLKQKIQNLHLELQEARDKALVLDIEKKNLERTNMQFDAFLKSVDEQTKLHF
ENLANKIFDEKMNKFSKMSREGLHYLLEPVKENMQILKKELEEAFVRQGKEQFSLKNEIQRIVLANERITLQAENLASAL
KGNNKLQGSWGEVILEKVLEDSGLRRDQDYKMHSAGMSLTGITGGKQYPDVVVLLPEDKHIVVDSKVSLVHYERYCSEKQ
DENLRLAHLKQFVHSVRSHVNDLAGKRYTDIDSLNAPDFVLMFIPIESAYFLMVRADTELHGYAWCKKVVIVCPSTLLAT
LRTIESLWRLEKQNRNTLEIARQGGALYDKIAGFIQDMQKLGKQLDVAGCVYRDAMKKLSEGHGNILSRTKNLKNLGVKA
SKSLEIEAVDG
>Mature_410_residues
AERSYYDVVIEKAGLEERLRENLEENAGLKQKIQNLHLELQEARDKALVLDIEKKNLERTNMQFDAFLKSVDEQTKLHFE
NLANKIFDEKMNKFSKMSREGLHYLLEPVKENMQILKKELEEAFVRQGKEQFSLKNEIQRIVLANERITLQAENLASALK
GNNKLQGSWGEVILEKVLEDSGLRRDQDYKMHSAGMSLTGITGGKQYPDVVVLLPEDKHIVVDSKVSLVHYERYCSEKQD
ENLRLAHLKQFVHSVRSHVNDLAGKRYTDIDSLNAPDFVLMFIPIESAYFLMVRADTELHGYAWCKKVVIVCPSTLLATL
RTIESLWRLEKQNRNTLEIARQGGALYDKIAGFIQDMQKLGKQLDVAGCVYRDAMKKLSEGHGNILSRTKNLKNLGVKAS
KSLEIEAVDG

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=326, Percent_Identity=39.8773006134969, Blast_Score=257, Evalue=8e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47036; Mature: 46905

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERSYYDVVIEKAGLEERLRENLEENAGLKQKIQNLHLELQEARDKALVLDIEKKNLER
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECHHCCHH
TNMQFDAFLKSVDEQTKLHFENLANKIFDEKMNKFSKMSREGLHYLLEPVKENMQILKKE
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEAFVRQGKEQFSLKNEIQRIVLANERITLQAENLASALKGNNKLQGSWGEVILEKVLE
HHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DSGLRRDQDYKMHSAGMSLTGITGGKQYPDVVVLLPEDKHIVVDSKVSLVHYERYCSEKQ
HCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCC
DENLRLAHLKQFVHSVRSHVNDLAGKRYTDIDSLNAPDFVLMFIPIESAYFLMVRADTEL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCH
HGYAWCKKVVIVCPSTLLATLRTIESLWRLEKQNRNTLEIARQGGALYDKIAGFIQDMQK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHH
LGKQLDVAGCVYRDAMKKLSEGHGNILSRTKNLKNLGVKASKSLEIEAVDG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
>Mature Secondary Structure 
AERSYYDVVIEKAGLEERLRENLEENAGLKQKIQNLHLELQEARDKALVLDIEKKNLER
CCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECHHCCHH
TNMQFDAFLKSVDEQTKLHFENLANKIFDEKMNKFSKMSREGLHYLLEPVKENMQILKKE
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEAFVRQGKEQFSLKNEIQRIVLANERITLQAENLASALKGNNKLQGSWGEVILEKVLE
HHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHH
DSGLRRDQDYKMHSAGMSLTGITGGKQYPDVVVLLPEDKHIVVDSKVSLVHYERYCSEKQ
HCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCC
DENLRLAHLKQFVHSVRSHVNDLAGKRYTDIDSLNAPDFVLMFIPIESAYFLMVRADTEL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCH
HGYAWCKKVVIVCPSTLLATLRTIESLWRLEKQNRNTLEIARQGGALYDKIAGFIQDMQK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHH
LGKQLDVAGCVYRDAMKKLSEGHGNILSRTKNLKNLGVKASKSLEIEAVDG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]