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The map label for this gene is msp4 [H]

Identifier: 88607702

GI number: 88607702

Start: 148302

End: 149309

Strand: Reverse

Name: msp4 [H]

Synonym: APH_0145

Alternate gene names: 88607702

Gene position: 149309-148302 (Counterclockwise)

Preceding gene: 88607478

Following gene: 88607140

Centisome position: 10.15

GC content: 42.46

Gene sequence:

>1008_bases
ATGCTAAGGCTCATGGTGATGGTAGTGCTTCAGGGGTCTGGTAGAGCGGGATATTTCTATGTTGGCTTGGATTACAGTCC
AGCGTTTAGCAAGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAGAGACTAAGGCAGTATATCCATACTTAAAGGATG
GAAAGAGTGTAAAGCTAGAGTCTAACAAGTTTGACTGGAACACACCTGATCCTCGGATTGGGTTTAAGGACAACATGCTT
GTAGCTATGGAAGGTAGTGTTGGTTATGGTATTGGTGGTGCCAGGGTTGAGCTTGAGATTGGTTACGAGCGCTTCAAGAC
CAAGGGTATTAGAGATAGTGGTAGTAAGGAAGATGAAGCTGATACAGTATATCTACTAGCTAAGGAGTTAGCTTATGATG
TTGTTACTGGACAGACTGATAACCTTGCTGCTGCTCTTGCCAAAACTTCGGGTAAAGACTTTGTTCAGTTTGCTAAGGCG
GTTGTGGTTTCTCATCCCGGTATTGATAAGAAGGTTTGTGCGACGAAAGCCCAAAGTTCTGGAAAGTATGGTAAGTATGC
TGATAAAACCGGTACGAAGAGCAGTGACAACAATACATCGTTATGTAGTGATGATGGGGGAAGTCATAGCGGTAGTAGTA
ACAACGCAGAGGTTTTCGAGCATTTTATAAAGAAAACTCTTTTGGAAAATGGTAGTAAGAATTGGCCGACATCTACGAAA
AATGATGGAGCGCCATCTGATAATAAAAACGACAATGCAGACGCCGTAGCGAAAGATCTAACAAAACTCACTTCCGAAGA
AAAAACCATAGTAGCAGGGTTACTAGCTAAGACTATTGAAGGGGGTGAAGTTGTTGAGATCAGGGCGGTTTCTTCTACTT
CTGTAATGGTCAATGCTTGTTATGATCTTCTTAGTGAAGGTTTAGGTGTTGTTCCTTATGCTTGTGTTGGTTTAGGGGGT
AACTTCGTGGGTGTTGTTGATGGCTCACGTCGCACAATACGTTTTTGA

Upstream 100 bases:

>100_bases
CACGTTTTGAGGTAGTCCGTGGTAAGCTGGTATAGAAGATCTGGAAGTAAGCTATTTTTAGGGAGCGTGATGTCATTAGC
CATAGTAATGGCGGGACAAG

Downstream 100 bases:

>100_bases
TCCTAAATACCCGAGGCAAGTGACTAGACAAAATTAGTGCCGTATCACTCACGAAACAAACTACGATCAGCGATTCTCCA
TACTTAGCAGGTCCGTACAG

Product: P44-8 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLRLMVMVVLQGSGRAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESNKFDWNTPDPRIGFKDNML
VAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDFVQFAKA
VVVSHPGIDKKVCATKAQSSGKYGKYADKTGTKSSDNNTSLCSDDGGSHSGSSNNAEVFEHFIKKTLLENGSKNWPTSTK
NDGAPSDNKNDNADAVAKDLTKLTSEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGG
NFVGVVDGSRRTIRF

Sequences:

>Translated_335_residues
MLRLMVMVVLQGSGRAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESNKFDWNTPDPRIGFKDNML
VAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDFVQFAKA
VVVSHPGIDKKVCATKAQSSGKYGKYADKTGTKSSDNNTSLCSDDGGSHSGSSNNAEVFEHFIKKTLLENGSKNWPTSTK
NDGAPSDNKNDNADAVAKDLTKLTSEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGG
NFVGVVDGSRRTIRF
>Mature_335_residues
MLRLMVMVVLQGSGRAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESNKFDWNTPDPRIGFKDNML
VAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDFVQFAKA
VVVSHPGIDKKVCATKAQSSGKYGKYADKTGTKSSDNNTSLCSDDGGSHSGSSNNAEVFEHFIKKTLLENGSKNWPTSTK
NDGAPSDNKNDNADAVAKDLTKLTSEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGG
NFVGVVDGSRRTIRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 35895; Mature: 35895

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLMVMVVLQGSGRAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLE
CCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHCCEEECCCCCEEEEEEEECCCCEEEEE
SNKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCC
DTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDFVQFAKAVVVSHPGIDKKVCATKAQSS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
GKYGKYADKTGTKSSDNNTSLCSDDGGSHSGSSNNAEVFEHFIKKTLLENGSKNWPTSTK
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
NDGAPSDNKNDNADAVAKDLTKLTSEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNAC
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
YDLLSEGLGVVPYACVGLGGNFVGVVDGSRRTIRF
HHHHHCCCCCCCHHEEECCCCEEEEEECCCEEECC
>Mature Secondary Structure
MLRLMVMVVLQGSGRAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLE
CCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHCCEEECCCCCEEEEEEEECCCCEEEEE
SNKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCC
DTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDFVQFAKAVVVSHPGIDKKVCATKAQSS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
GKYGKYADKTGTKSSDNNTSLCSDDGGSHSGSSNNAEVFEHFIKKTLLENGSKNWPTSTK
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
NDGAPSDNKNDNADAVAKDLTKLTSEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNAC
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
YDLLSEGLGVVPYACVGLGGNFVGVVDGSRRTIRF
HHHHHCCCCCCCHHEEECCCCEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]