| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607654
Identifier: 88607654
GI number: 88607654
Start: 418811
End: 420421
Strand: Direct
Name: 88607654
Synonym: APH_0405
Alternate gene names: NA
Gene position: 418811-420421 (Clockwise)
Preceding gene: 88607267
Following gene: 88607117
Centisome position: 28.47
GC content: 44.82
Gene sequence:
>1611_bases ATGGCGATGCTTCTCCTGGGGTCCTCTGGTGGTGTAGTTGCTGCATCTTCTGGAGGGGGGTTTGAAGGAGAGCGTGCGTC GGTAACGGGTAAGGTGTTATCTTATGCCTGGTTGTTGAGTGATCGGGCTGTAAAAGGGCAAGGTAACAGTGAAGGTCAGA AGCTCGCGCTGGAAATGTATGGCGCAAAGTTGGGCTATAAGGGTTATGGTTATCCAGGAGTTGGAGATGTCTTTTCTTCG CCGTTGGAGCATGGTCTTGATTCTTGGGGAGCTAGCTATGATGCGATGTTATCTCTTGGATTGCGTACGGGTCGTGATGT GCTAGGTACCCAATATGGGGCAAATTTTTCCCTTATGGTTCCTGCGGGTTCTGGTGGATCTATGGTGTTTCATGGTGCGC CTGGTATAGAGAGCAGGGTTTTTGCTGATACTTCCTTGGGAAATTTTTCTGTTGGTTACCAGGAAGGTGTCGAGTCAAAA ATGAAGGTGGATGTCTTCGGTGGCTTATCAGGTGAAAATGGAAGCGCTTGGGGTCGGTACTTGCGTGGCTTTTTAAAGTA TGCGAAGGGTGTACCTTTTCACATGTATCCAGGGCTTTACAGTGAGAATTTATTCCGGTCTACAAGAGACTTACGGGGTG TTAGTGGTGTTTCTGCGAAGACAAAGGATGTCTTAAATTCTATGCCGCTGAGGTTTTCTTTTGAGTCTGCTAGGTTGGGT GGCTTGTCTGTTGGTTTTAGTTACTCTCCAACGGGATATCGGGATGATATGTACAAGGGTGGAGAGTTTACTGTACGGGA TGGTATTGCTGGTTTCGATTCCTTGGGTACAGTAAATTTATTCGCGAAGACGGGGGTTAAGTTTGGCAAAATGATTGCCG TGGTGCCTCCTCGTTTTGATTCTGGTCCGGTATATAAAAACATAGTAAGCGGTGCTGCGAATTACGAGTACGAGTTAGCC GATATTGCTAAGTTTAGGTTATCGCTTGCTGGTGAGTATGCAAGACCGAAGAAGGCTAGGGATATAGTGCCAGAAGGAAG AAGAAAGGAAGAAATTTATGTAGCTGATTACAATGATTTGTCCGCGTTTTCCAGTGGCTTAGAAATAGACTTGGGTAGGT TGCGGTTTGCTGTTGGCGGTGGATACCTTGGGAAGTCTGGTAGTCCTAAAATGTACATATTAAAGGATGTAAGACATAAG GTACCTTATGTGAAAAAGAAGGGTTTGCCGTCTCATTATGTGACTTCAGCGGTTTCCTATACGATTGGTTCTTTCTCTGC TACAGTTGCTTACTTTATGAGTAGGTTAACGCACATTCCGCCTGCTACGGTATCTCATAAGATCCCAGGGAAGTATGAGT TGGATTCCGTTGTGGATGGGGAGAATACGTTGAAGGATTTGGTTGTAGGAGTCGGTTATAACCTTTTTAGTAAGGGAAGT ACGAGCTTAGAAGTATTTCTAAATTGTCACATGTTCTCTGTGCAACATAAATTCAACATCCATGAGTACAAATCTACTGA GAGTAGTGGGTTTGTATTGAAAGAAGGTGGAGAGCGTGCAAATACTAATAATGGCGCTGTGGCGTTATTAGGAATGAAGT TTGCGTTTTAA
Upstream 100 bases:
>100_bases GCTTGATGGCTTTAGGTGTGAAGCTGGTCTTCTAAGAAGAGTGTGGGTGTTTGTGGATTTTTGAAGGTTTTGTATGAGAG GTTCTCTGGTAGTTGTGAGT
Downstream 100 bases:
>100_bases TAACAAGGGGTTGTTGCAAGAATACTCTTGTGGTTTATTTAGCCAAGTCTTCTTATTGGGGCGTGTACTGAGGTACGGCG CCCCTTTTTTTGTGGAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MAMLLLGSSGGVVAASSGGGFEGERASVTGKVLSYAWLLSDRAVKGQGNSEGQKLALEMYGAKLGYKGYGYPGVGDVFSS PLEHGLDSWGASYDAMLSLGLRTGRDVLGTQYGANFSLMVPAGSGGSMVFHGAPGIESRVFADTSLGNFSVGYQEGVESK MKVDVFGGLSGENGSAWGRYLRGFLKYAKGVPFHMYPGLYSENLFRSTRDLRGVSGVSAKTKDVLNSMPLRFSFESARLG GLSVGFSYSPTGYRDDMYKGGEFTVRDGIAGFDSLGTVNLFAKTGVKFGKMIAVVPPRFDSGPVYKNIVSGAANYEYELA DIAKFRLSLAGEYARPKKARDIVPEGRRKEEIYVADYNDLSAFSSGLEIDLGRLRFAVGGGYLGKSGSPKMYILKDVRHK VPYVKKKGLPSHYVTSAVSYTIGSFSATVAYFMSRLTHIPPATVSHKIPGKYELDSVVDGENTLKDLVVGVGYNLFSKGS TSLEVFLNCHMFSVQHKFNIHEYKSTESSGFVLKEGGERANTNNGAVALLGMKFAF
Sequences:
>Translated_536_residues MAMLLLGSSGGVVAASSGGGFEGERASVTGKVLSYAWLLSDRAVKGQGNSEGQKLALEMYGAKLGYKGYGYPGVGDVFSS PLEHGLDSWGASYDAMLSLGLRTGRDVLGTQYGANFSLMVPAGSGGSMVFHGAPGIESRVFADTSLGNFSVGYQEGVESK MKVDVFGGLSGENGSAWGRYLRGFLKYAKGVPFHMYPGLYSENLFRSTRDLRGVSGVSAKTKDVLNSMPLRFSFESARLG GLSVGFSYSPTGYRDDMYKGGEFTVRDGIAGFDSLGTVNLFAKTGVKFGKMIAVVPPRFDSGPVYKNIVSGAANYEYELA DIAKFRLSLAGEYARPKKARDIVPEGRRKEEIYVADYNDLSAFSSGLEIDLGRLRFAVGGGYLGKSGSPKMYILKDVRHK VPYVKKKGLPSHYVTSAVSYTIGSFSATVAYFMSRLTHIPPATVSHKIPGKYELDSVVDGENTLKDLVVGVGYNLFSKGS TSLEVFLNCHMFSVQHKFNIHEYKSTESSGFVLKEGGERANTNNGAVALLGMKFAF >Mature_535_residues AMLLLGSSGGVVAASSGGGFEGERASVTGKVLSYAWLLSDRAVKGQGNSEGQKLALEMYGAKLGYKGYGYPGVGDVFSSP LEHGLDSWGASYDAMLSLGLRTGRDVLGTQYGANFSLMVPAGSGGSMVFHGAPGIESRVFADTSLGNFSVGYQEGVESKM KVDVFGGLSGENGSAWGRYLRGFLKYAKGVPFHMYPGLYSENLFRSTRDLRGVSGVSAKTKDVLNSMPLRFSFESARLGG LSVGFSYSPTGYRDDMYKGGEFTVRDGIAGFDSLGTVNLFAKTGVKFGKMIAVVPPRFDSGPVYKNIVSGAANYEYELAD IAKFRLSLAGEYARPKKARDIVPEGRRKEEIYVADYNDLSAFSSGLEIDLGRLRFAVGGGYLGKSGSPKMYILKDVRHKV PYVKKKGLPSHYVTSAVSYTIGSFSATVAYFMSRLTHIPPATVSHKIPGKYELDSVVDGENTLKDLVVGVGYNLFSKGST SLEVFLNCHMFSVQHKFNIHEYKSTESSGFVLKEGGERANTNNGAVALLGMKFAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57575; Mature: 57444
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLLLGSSGGVVAASSGGGFEGERASVTGKVLSYAWLLSDRAVKGQGNSEGQKLALEMY CEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEC GAKLGYKGYGYPGVGDVFSSPLEHGLDSWGASYDAMLSLGLRTGRDVLGTQYGANFSLMV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEE PAGSGGSMVFHGAPGIESRVFADTSLGNFSVGYQEGVESKMKVDVFGGLSGENGSAWGRY ECCCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEEEECCCCCCCHHHHHH LRGFLKYAKGVPFHMYPGLYSENLFRSTRDLRGVSGVSAKTKDVLNSMPLRFSFESARLG HHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCC GLSVGFSYSPTGYRDDMYKGGEFTVRDGIAGFDSLGTVNLFAKTGVKFGKMIAVVPPRFD CEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEHHHCCCCCCCEEEEECCCCC SGPVYKNIVSGAANYEYELADIAKFRLSLAGEYARPKKARDIVPEGRRKEEIYVADYNDL CCCHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEECCCH SAFSSGLEIDLGRLRFAVGGGYLGKSGSPKMYILKDVRHKVPYVKKKGLPSHYVTSAVSY HHHCCCCEEEHHHEEEEECCCCCCCCCCCCEEEEHHHHHHCCCHHHCCCCHHHHHHHHHH TIGSFSATVAYFMSRLTHIPPATVSHKIPGKYELDSVVDGENTLKDLVVGVGYNLFSKGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCC TSLEVFLNCHMFSVQHKFNIHEYKSTESSGFVLKEGGERANTNNGAVALLGMKFAF CEEEEEEEEEEEEEEEECCCHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure AMLLLGSSGGVVAASSGGGFEGERASVTGKVLSYAWLLSDRAVKGQGNSEGQKLALEMY EEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEC GAKLGYKGYGYPGVGDVFSSPLEHGLDSWGASYDAMLSLGLRTGRDVLGTQYGANFSLMV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEE PAGSGGSMVFHGAPGIESRVFADTSLGNFSVGYQEGVESKMKVDVFGGLSGENGSAWGRY ECCCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEEEECCCCCCCHHHHHH LRGFLKYAKGVPFHMYPGLYSENLFRSTRDLRGVSGVSAKTKDVLNSMPLRFSFESARLG HHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCC GLSVGFSYSPTGYRDDMYKGGEFTVRDGIAGFDSLGTVNLFAKTGVKFGKMIAVVPPRFD CEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEHHHCCCCCCCEEEEECCCCC SGPVYKNIVSGAANYEYELADIAKFRLSLAGEYARPKKARDIVPEGRRKEEIYVADYNDL CCCHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEECCCH SAFSSGLEIDLGRLRFAVGGGYLGKSGSPKMYILKDVRHKVPYVKKKGLPSHYVTSAVSY HHHCCCCEEEHHHEEEEECCCCCCCCCCCCEEEEHHHHHHCCCHHHCCCCHHHHHHHHHH TIGSFSATVAYFMSRLTHIPPATVSHKIPGKYELDSVVDGENTLKDLVVGVGYNLFSKGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCC TSLEVFLNCHMFSVQHKFNIHEYKSTESSGFVLKEGGERANTNNGAVALLGMKFAF CEEEEEEEEEEEEEEEECCCHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA