Definition | Anaplasma phagocytophilum HZ, complete genome. |
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Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is 88607575
Identifier: 88607575
GI number: 88607575
Start: 200705
End: 201325
Strand: Direct
Name: 88607575
Synonym: APH_0203
Alternate gene names: NA
Gene position: 200705-201325 (Clockwise)
Preceding gene: 88607930
Following gene: 88606866
Centisome position: 13.64
GC content: 44.93
Gene sequence:
>621_bases ATGACCGGAGAGCTGGCTAGCATGGAGGCTTTTGCAGCGAAGCTGCTGCATGATGTTGCGGGTTCTGTGGGTTCGGTAGT GAGCTATATTGAATGCTTTTTAGATGATCCAGAATCCGATGATATACGAGTTTGTCTAGAGGAAGCGGCTGTTGAGATGA TATCGAGATTTAGGCTGATTAGGCAGGCTTATAGTGCTTCTGAGGATAACTCCTGTTTTGATACTACTAGGGAACATATT GAAAAATATTTGAAGAAAAGGGGTGTTCCTTCTTTCTCCCTATGTATTGAGGGGCAGTTTTATGACGCAAAGCTTGTGGA GCAAGTGAACAGGTTGTTAGTTCAAGCAGCGCTGTTTTCTGCTATGGCTATGGTAAGGGGAAAGGGGATGTTTGTCTCTA TCTCTAAGACAGAGAGTATGGTTGCGATACGGCTAGTGCTTGATGCTGAAGAGATATCTGTTCATAAAGATGTGGAGAGT GTACTAGGAAACGCGAATGCTTGCGCTCTCACAACACACAACGTACAGGCGTACTTTATGACCTTACTCTGTAAGGAGTA CGGCGCTACGTTGCGTTATGACCCAGAAAATGCGCTGGTAGAGGTGGTTTTAGCTCTGTAA
Upstream 100 bases:
>100_bases AGAGAGAGTAACACTAGATGCGTGAAACTTGTACAAAAATATTTATTGATTAACTATACCCATACTATAAAATTCTGGCT ACTTTCGTACTAGGGTAATT
Downstream 100 bases:
>100_bases TGCTGGTTATACAGCCGGGCGCTATTCTTATCATAAGATGTGCGTATTTTACGGATAATTTCTGGGGACGGGTTGAGTTG TTTTCTGGTATTCTTGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTGELASMEAFAAKLLHDVAGSVGSVVSYIECFLDDPESDDIRVCLEEAAVEMISRFRLIRQAYSASEDNSCFDTTREHI EKYLKKRGVPSFSLCIEGQFYDAKLVEQVNRLLVQAALFSAMAMVRGKGMFVSISKTESMVAIRLVLDAEEISVHKDVES VLGNANACALTTHNVQAYFMTLLCKEYGATLRYDPENALVEVVLAL
Sequences:
>Translated_206_residues MTGELASMEAFAAKLLHDVAGSVGSVVSYIECFLDDPESDDIRVCLEEAAVEMISRFRLIRQAYSASEDNSCFDTTREHI EKYLKKRGVPSFSLCIEGQFYDAKLVEQVNRLLVQAALFSAMAMVRGKGMFVSISKTESMVAIRLVLDAEEISVHKDVES VLGNANACALTTHNVQAYFMTLLCKEYGATLRYDPENALVEVVLAL >Mature_205_residues TGELASMEAFAAKLLHDVAGSVGSVVSYIECFLDDPESDDIRVCLEEAAVEMISRFRLIRQAYSASEDNSCFDTTREHIE KYLKKRGVPSFSLCIEGQFYDAKLVEQVNRLLVQAALFSAMAMVRGKGMFVSISKTESMVAIRLVLDAEEISVHKDVESV LGNANACALTTHNVQAYFMTLLCKEYGATLRYDPENALVEVVLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22780; Mature: 22649
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGELASMEAFAAKLLHDVAGSVGSVVSYIECFLDDPESDDIRVCLEEAAVEMISRFRLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RQAYSASEDNSCFDTTREHIEKYLKKRGVPSFSLCIEGQFYDAKLVEQVNRLLVQAALFS HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH AMAMVRGKGMFVSISKTESMVAIRLVLDAEEISVHKDVESVLGNANACALTTHNVQAYFM HHHHHHCCCEEEEEECCCCEEEEHEEECHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH TLLCKEYGATLRYDPENALVEVVLAL HHHHHHHCCCEEECCHHHHHHHHHCC >Mature Secondary Structure TGELASMEAFAAKLLHDVAGSVGSVVSYIECFLDDPESDDIRVCLEEAAVEMISRFRLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RQAYSASEDNSCFDTTREHIEKYLKKRGVPSFSLCIEGQFYDAKLVEQVNRLLVQAALFS HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH AMAMVRGKGMFVSISKTESMVAIRLVLDAEEISVHKDVESVLGNANACALTTHNVQAYFM HHHHHHCCCEEEEEECCCCEEEEHEEECHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH TLLCKEYGATLRYDPENALVEVVLAL HHHHHHHCCCEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA