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The map label for this gene is 88607562

Identifier: 88607562

GI number: 88607562

Start: 486569

End: 488020

Strand: Reverse

Name: 88607562

Synonym: APH_0457

Alternate gene names: NA

Gene position: 488020-486569 (Counterclockwise)

Preceding gene: 88607577

Following gene: 88607610

Centisome position: 33.17

GC content: 43.46

Gene sequence:

>1452_bases
ATGCACATGCTCACTGTATGTAGTGGCACACATGGCTTCAAGTATTCTTATACTGCTGAGACTTCCTCTGCATATAAGGA
TATCATATGCGCCGGGATTTATACTAGAGTGTTTTCCCCCGTAGATTTCTCAAAAATCCTACTCTGCAATATTGAAGCTT
TGCAGCAAACATTAGACCGTGCGTTCTCTTTAGATCCAGAATTTTCTTCTATTGCTGCAAGAGTTGCTGCTATAAAACTG
CTCTTAATAACCAAAAATGCTGGTAGTAGCAAAGACCCAACAGCAGAAGAGGCAATTTTAGCGCAAGTGCATGGTGTCTT
TAATTTGCTGTACGATGCGCTGTACGCTTGTGTTACTGCCACCTGCAATTCTGAACCAGGTAGGTTTATTAGCCCTACAC
ATACAGAACATGGTTTGCATCTACATGCGGCTACGGCAGTTGCCTTGCTAGTCAATATCATCATGATGTGTCGCTACTTT
GTATTGGTTAGCACTTCTCAATCTCCAGTTACGAGCGAGGAGACCAGCACACATCCCGTAATGGATATCAAGTTGGCAGT
TAACGCGTACATAGACGCTGTTCAGTCAGCCACTCGTCGCTCTTGTATGCTAGCTGAAGTGCCTGAAGAAGAAATAAAGG
CATTTTCCAATGCAATACTACATAACTCTGAGCTTCTCATAAGAGTTTCCGAATTGCTTGATGAAGACGGCCCATTTTTG
CACCGGTCAAGTACAGAACATTGCTTGAATACCCTACTTAGCACGATCAGCCGTTTATCTTCTACCTGTAGCCGATTAGG
AACTCACATAAACGATGGTATTGTATCATCGCGTAGAGCCCTGAGTAGTGAATCATATATCATGCTTAGATCTCAGCTAA
ACCGTTATGCTCTCCGCACGCTGGACCATGATGCACTCCGTACGGATAGCTCTCTTAAAAATCGCAATACAAATATTGTG
CAAGATTTGGTTAGTGGATTGGGTGGCTTGTGCCTTATACGAAGGGAATACTCTTCTGTAAGCGCTGAAGAGCATCCTTA
TGCGAGCCATATTGAGCGTTGTATTAGGCTCATACGCGACAAAGTTTACTCAAGTATACATGCTTCCGAAATGGAGGATG
CACTTAGTCCATCACAAAGCACAAATCATGCAGTACAGTTACACCTTAGTGAAGCAATTGCAGGCCTAAAATGCATCAGG
GCGAGCCTACTATTAAATCCATCGATTACTACTGAGTTACACGAAACGGCACTGAATCATCTAGAGAAGGCGGAACGTCT
TTGGAAATCTAAACACGACGTAGAACAAGCACACTCTTCTTCTGATATGGAAACCTCGGGGCAGGAAAGCACTAGTTCTA
TACTACAAGACTTACTTGTAACCTCCCCACTACAATCAAATAACGAAAGTGAACTTATGCAGCCTCCTCAAAAACGCCCG
CGGTCCGTATAA

Upstream 100 bases:

>100_bases
GCATCTCATAAAGCCATTACTTTTGAGCATATACTCTATGAGTTAATACTCTTGAAAGTATATAACATTCGCGCTACAGT
GTATTACATTATTAACTAAT

Downstream 100 bases:

>100_bases
TCTTTCTCTCGAGTATGCTCTTAGCATCATGCCTTATTGTGGGCTTCTCTTTATATACAGTCTGAGGCATACTCATTTCG
AAACTGCGGTAGACGCATCA

Product: HGE-14 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MHMLTVCSGTHGFKYSYTAETSSAYKDIICAGIYTRVFSPVDFSKILLCNIEALQQTLDRAFSLDPEFSSIAARVAAIKL
LLITKNAGSSKDPTAEEAILAQVHGVFNLLYDALYACVTATCNSEPGRFISPTHTEHGLHLHAATAVALLVNIIMMCRYF
VLVSTSQSPVTSEETSTHPVMDIKLAVNAYIDAVQSATRRSCMLAEVPEEEIKAFSNAILHNSELLIRVSELLDEDGPFL
HRSSTEHCLNTLLSTISRLSSTCSRLGTHINDGIVSSRRALSSESYIMLRSQLNRYALRTLDHDALRTDSSLKNRNTNIV
QDLVSGLGGLCLIRREYSSVSAEEHPYASHIERCIRLIRDKVYSSIHASEMEDALSPSQSTNHAVQLHLSEAIAGLKCIR
ASLLLNPSITTELHETALNHLEKAERLWKSKHDVEQAHSSSDMETSGQESTSSILQDLLVTSPLQSNNESELMQPPQKRP
RSV

Sequences:

>Translated_483_residues
MHMLTVCSGTHGFKYSYTAETSSAYKDIICAGIYTRVFSPVDFSKILLCNIEALQQTLDRAFSLDPEFSSIAARVAAIKL
LLITKNAGSSKDPTAEEAILAQVHGVFNLLYDALYACVTATCNSEPGRFISPTHTEHGLHLHAATAVALLVNIIMMCRYF
VLVSTSQSPVTSEETSTHPVMDIKLAVNAYIDAVQSATRRSCMLAEVPEEEIKAFSNAILHNSELLIRVSELLDEDGPFL
HRSSTEHCLNTLLSTISRLSSTCSRLGTHINDGIVSSRRALSSESYIMLRSQLNRYALRTLDHDALRTDSSLKNRNTNIV
QDLVSGLGGLCLIRREYSSVSAEEHPYASHIERCIRLIRDKVYSSIHASEMEDALSPSQSTNHAVQLHLSEAIAGLKCIR
ASLLLNPSITTELHETALNHLEKAERLWKSKHDVEQAHSSSDMETSGQESTSSILQDLLVTSPLQSNNESELMQPPQKRP
RSV
>Mature_483_residues
MHMLTVCSGTHGFKYSYTAETSSAYKDIICAGIYTRVFSPVDFSKILLCNIEALQQTLDRAFSLDPEFSSIAARVAAIKL
LLITKNAGSSKDPTAEEAILAQVHGVFNLLYDALYACVTATCNSEPGRFISPTHTEHGLHLHAATAVALLVNIIMMCRYF
VLVSTSQSPVTSEETSTHPVMDIKLAVNAYIDAVQSATRRSCMLAEVPEEEIKAFSNAILHNSELLIRVSELLDEDGPFL
HRSSTEHCLNTLLSTISRLSSTCSRLGTHINDGIVSSRRALSSESYIMLRSQLNRYALRTLDHDALRTDSSLKNRNTNIV
QDLVSGLGGLCLIRREYSSVSAEEHPYASHIERCIRLIRDKVYSSIHASEMEDALSPSQSTNHAVQLHLSEAIAGLKCIR
ASLLLNPSITTELHETALNHLEKAERLWKSKHDVEQAHSSSDMETSGQESTSSILQDLLVTSPLQSNNESELMQPPQKRP
RSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53281; Mature: 53281

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMLTVCSGTHGFKYSYTAETSSAYKDIICAGIYTRVFSPVDFSKILLCNIEALQQTLDR
CCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AFSLDPEFSSIAARVAAIKLLLITKNAGSSKDPTAEEAILAQVHGVFNLLYDALYACVTA
HHCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TCNSEPGRFISPTHTEHGLHLHAATAVALLVNIIMMCRYFVLVSTSQSPVTSEETSTHPV
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
MDIKLAVNAYIDAVQSATRRSCMLAEVPEEEIKAFSNAILHNSELLIRVSELLDEDGPFL
EEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
HRSSTEHCLNTLLSTISRLSSTCSRLGTHINDGIVSSRRALSSESYIMLRSQLNRYALRT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LDHDALRTDSSLKNRNTNIVQDLVSGLGGLCLIRREYSSVSAEEHPYASHIERCIRLIRD
CCHHHHHCCCHHHCCCHHHHHHHHHCCCHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KVYSSIHASEMEDALSPSQSTNHAVQLHLSEAIAGLKCIRASLLLNPSITTELHETALNH
HHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LEKAERLWKSKHDVEQAHSSSDMETSGQESTSSILQDLLVTSPLQSNNESELMQPPQKRP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
RSV
CCC
>Mature Secondary Structure
MHMLTVCSGTHGFKYSYTAETSSAYKDIICAGIYTRVFSPVDFSKILLCNIEALQQTLDR
CCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AFSLDPEFSSIAARVAAIKLLLITKNAGSSKDPTAEEAILAQVHGVFNLLYDALYACVTA
HHCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TCNSEPGRFISPTHTEHGLHLHAATAVALLVNIIMMCRYFVLVSTSQSPVTSEETSTHPV
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
MDIKLAVNAYIDAVQSATRRSCMLAEVPEEEIKAFSNAILHNSELLIRVSELLDEDGPFL
EEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
HRSSTEHCLNTLLSTISRLSSTCSRLGTHINDGIVSSRRALSSESYIMLRSQLNRYALRT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LDHDALRTDSSLKNRNTNIVQDLVSGLGGLCLIRREYSSVSAEEHPYASHIERCIRLIRD
CCHHHHHCCCHHHCCCHHHHHHHHHCCCHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KVYSSIHASEMEDALSPSQSTNHAVQLHLSEAIAGLKCIRASLLLNPSITTELHETALNH
HHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LEKAERLWKSKHDVEQAHSSSDMETSGQESTSSILQDLLVTSPLQSNNESELMQPPQKRP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
RSV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA