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The map label for this gene is sdhD

Identifier: 88607526

GI number: 88607526

Start: 1056603

End: 1056932

Strand: Reverse

Name: sdhD

Synonym: APH_0998

Alternate gene names: NA

Gene position: 1056932-1056603 (Counterclockwise)

Preceding gene: 88607062

Following gene: 88607221

Centisome position: 71.84

GC content: 43.33

Gene sequence:

>330_bases
ATGTCAGGAAAGAGTATTTTACACTGGTGGATGCAGCGGATGACTGCGGTGGTAATGCTGCCGGTTCCAATATTCCTTGT
GAAGGCGTTATTAGTTTCTGATTTTGCTACGGGGCTTCTAGATTTAACGCATGGGTACAAGGGGGCATTGACTGCTTTAT
TTTTGATGCCGGCTTTTTATCATGGTGTTTTGGGTGTGCAGGTTGTCTTGGAGGATTATGTGCGCTCTGATGCGCTACGA
GCTTTTCTGATTACTTTCATAAAATTATTTGCTGTACTAACAGTTTGTGTATTTTCTTTGGTGGTGTTGCTGCGTACGCT
AGGTATGTAG

Upstream 100 bases:

>100_bases
CTTTGGTAAATCTGAGGCTACTTTCAGTGGTTGGTTGATGTTAGGTTTTGCGGTGACCTCGTTGATCGGGCTGGGTTTTA
TAGGTTTCTTCAGTTAATAT

Downstream 100 bases:

>100_bases
GTCAAGCTGCCTTTATTATGGCGTAAGGCGCCTTTGGTATGTTATATCAAAAAAGATAGTTGGATCTTTCCTTCGCCATA
GTGGCTCTTGGGGTGTTATG

Product: succinate dehydrogenase, hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehyrdrogenase Subunit D; Succinate Dehydrogenase Subunit D

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSGKSILHWWMQRMTAVVMLPVPIFLVKALLVSDFATGLLDLTHGYKGALTALFLMPAFYHGVLGVQVVLEDYVRSDALR
AFLITFIKLFAVLTVCVFSLVVLLRTLGM

Sequences:

>Translated_109_residues
MSGKSILHWWMQRMTAVVMLPVPIFLVKALLVSDFATGLLDLTHGYKGALTALFLMPAFYHGVLGVQVVLEDYVRSDALR
AFLITFIKLFAVLTVCVFSLVVLLRTLGM
>Mature_108_residues
SGKSILHWWMQRMTAVVMLPVPIFLVKALLVSDFATGLLDLTHGYKGALTALFLMPAFYHGVLGVQVVLEDYVRSDALRA
FLITFIKLFAVLTVCVFSLVVLLRTLGM

Specific function: Unknown

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 12132; Mature: 12001

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKSILHWWMQRMTAVVMLPVPIFLVKALLVSDFATGLLDLTHGYKGALTALFLMPAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HGVLGVQVVLEDYVRSDALRAFLITFIKLFAVLTVCVFSLVVLLRTLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGKSILHWWMQRMTAVVMLPVPIFLVKALLVSDFATGLLDLTHGYKGALTALFLMPAFY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HGVLGVQVVLEDYVRSDALRAFLITFIKLFAVLTVCVFSLVVLLRTLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA