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The map label for this gene is 88607430

Identifier: 88607430

GI number: 88607430

Start: 162420

End: 162578

Strand: Direct

Name: 88607430

Synonym: APH_0160

Alternate gene names: NA

Gene position: 162420-162578 (Clockwise)

Preceding gene: 88606897

Following gene: 88607039

Centisome position: 11.04

GC content: 44.03

Gene sequence:

>159_bases
ATGGTGGATGAGGCTACGGAATATACGAAGCGTTTGGTAGTGCCGGCACTTGAGAATGTGTTATATCAGGAACATAAGGT
GTTGGATCATGGTTTTGTGCGGGTTATTGACTACATGGGGGATTGTGGTAGCCTAAAAGTAGTTCCGGTTATGTTATAG

Upstream 100 bases:

>100_bases
TACTATCATGAATTGTACTAAGACTTGTCCCAAGGATCTGAATCCTGCTAAGGCGATAGCGAAAATAAAGCAGATGATGA
TAAAAGGATTGGAGCTCTAG

Downstream 100 bases:

>100_bases
TGTGCCTGAGGTGTCTAGATCCGCATACGAAGTTGTGGACCATGAGTATGACGTGGTTGTTGTTGGTGCGGGTGGTGCAG
GGTTGCGCGTAGTGATTGGT

Product: putative thymidylate synthase, flavin-dependent, truncation

Products: NA

Alternate protein names: FAD-Dependent Thymidylate Synthase

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MVDEATEYTKRLVVPALENVLYQEHKVLDHGFVRVIDYMGDCGSLKVVPVML

Sequences:

>Translated_52_residues
MVDEATEYTKRLVVPALENVLYQEHKVLDHGFVRVIDYMGDCGSLKVVPVML
>Mature_52_residues
MVDEATEYTKRLVVPALENVLYQEHKVLDHGFVRVIDYMGDCGSLKVVPVML

Specific function: Unknown

COG id: COG1351

COG function: function code F; Predicted alternative thymidylate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5922; Mature: 5922

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDEATEYTKRLVVPALENVLYQEHKVLDHGFVRVIDYMGDCGSLKVVPVML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
>Mature Secondary Structure
MVDEATEYTKRLVVPALENVLYQEHKVLDHGFVRVIDYMGDCGSLKVVPVML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA