| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607378
Identifier: 88607378
GI number: 88607378
Start: 458719
End: 460512
Strand: Direct
Name: 88607378
Synonym: APH_0441
Alternate gene names: NA
Gene position: 458719-460512 (Clockwise)
Preceding gene: 88607594
Following gene: 88607294
Centisome position: 31.18
GC content: 45.15
Gene sequence:
>1794_bases GTGTTGTTCTTTTATATATCGGCTTCATCGGTTAGTTACATGTTGAGATTTGTACTGTCTGTAGTGGTTTTATTGATTCT CTCTTCTTGTGGAGGCAAGTATGCTTTTGAGATGAGTAGAAATTATGCTCCTCCGTATAATCCTGGTGGGGATTATTTCG ATGATGATGAGAGTTTTGCTCAATCTTACGAGATATACGAGAAGCGTAGAGAAGATGCTCTTCGTGAACAAGAGAGTATG AAAAAGCGGAATCGTGGCAGGGATTTGCAGCAGAAAAGTGGGCGTCGCCAGATCAGTGATGAGGAAAAAGGCAGGATTAT CAATGAGTTGCAAAGATATGGTGTAATGTACAATGCTGGTGAGCGCAGGAAAGGTGGGATGGTAAACAGCGAGGGTATCG ACCTTTCTCGTGTGAGGGGAGCACGCTTTATAGATGTTGATCTGAATAAGAGTGGGGTTATTTCTGGGAAAGAAGAAAGG GTTGACGAATCGATCTTGGTAAAAACTAAAGAAGGTGAGTTGCTTGATGCAGAAGAGCAAAGTTCTATGCTTAGCGGCGG ATTGCCAGGGGATAGTGCTGATGAAGAACACGAGGAGTTTGAAGTAAATATTGATTGTGACTGCGGCGACGATTGCGATT GTCCTACCGGTGCTCACAAATCTCATGGGGGACACAAGAAGTTGTCTCATCCTGTAGAGGTGGAAGAGGAGCAAAGTCCT GCGCTTGATGTGATAAGTAGTGAATTGCCTAAGGATGACATTGCTGAGGATCAAGAGGGGATAGGGGTAAAAGGTGGCTG CAATGCTGGAGATGATAGCGATTGTCCTACTGGCGCTCACAAATCTCATGGGGGACACAAGAAGTTGTCTCATCCTGTAG AGGTGAAAGAGGAGCAAAGACCTGCGCTTGATGTGATAAGTAGTGAATTGCCTAAGGATGACATTGCTGAGGATCAAGAG GGGATAAAAGTAGATTGCGACTGCGGAGATGATTGCGATTGTCCTACTGGCGCTCACAAATCTCATGGGGGACACAAGAA GTTGTCTCATCCTGTAGAGGTGAAAGAGGAGCAAAGACCTGCGCTTGATGTGATAAGTAGTGAATTGCCTAAGGATGACA TTGCTGAGGATCAAGAGGGGATAGGGGTAAAAGGTGGCTGCAATGCTGGAGATGATTGCCCTAGTGATGAGTTGAATCTA GAGCATGGAAATAAGGAGGTTGCGGTTTACGGAGAGGAAGGTGCTTCAAGTAAAGATGAGGATAATGTTGCAGAGTATGG TTCTGTTGGTGATGTTGGCGCCGATAGAGATGATGTAGCTGAAGGTAATGATATTTACCCGTGGTGGGAAGAATATGATG TCGTAGAAGGGTTTGGGGCGTTTGATGACAGCTCCGATGGTGAGGGTTACTACTCCGAAAGTTCTCCTGTGTTTGGAGAA GAAGAGCGTGCCGAAGAAGATTTTGATGTGTATCAAGATCCAGTAGAAGTGGATGATGAGGGAGTTGCTGATTCTTCTGA GGATTTAGAGGCTGATTCTGGTGCGGACTCTGTGACAGATTGGGAAGAAGAAGGTGACTATTTGCCAAATGATGGCGATG TTACTACTTCTTCTAGTGCTGGTAAAGGCGCGGCAGATGACTTATCAGTCGATGATTCAACTTTCCTTGATGAAGGTGAA GAAGGTGGGTACAAAGGAATTGATAAGGATAGCGACGGATATCGTATTCCTATGTCGTTGCCAGATAGTCGTTCCAGGTA TTATGATCTTGGTGATTTTGTGAGCCTAAGGTAG
Upstream 100 bases:
>100_bases AATGTTGTATTGGATTGCTTAATGGTGTTATTTATTCTAAAGCAGTGATGCACACTATACTTTTGGGTGCGTATGTTCTG TTGGGCTTGGCTTTATAGAT
Downstream 100 bases:
>100_bases GTTCGCTATTTCACGTTGTGTATGTGGGAGTGTTACTGTATTCGTGGCGTTTGTAGGTTGCGAGTAGGGTAGCGCTCTCA GTTTTTAGTGTAGAAATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MLFFYISASSVSYMLRFVLSVVVLLILSSCGGKYAFEMSRNYAPPYNPGGDYFDDDESFAQSYEIYEKRREDALREQESM KKRNRGRDLQQKSGRRQISDEEKGRIINELQRYGVMYNAGERRKGGMVNSEGIDLSRVRGARFIDVDLNKSGVISGKEER VDESILVKTKEGELLDAEEQSSMLSGGLPGDSADEEHEEFEVNIDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVEEEQSP ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDSDCPTGAHKSHGGHKKLSHPVEVKEEQRPALDVISSELPKDDIAEDQE GIKVDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVKEEQRPALDVISSELPKDDIAEDQEGIGVKGGCNAGDDCPSDELNL EHGNKEVAVYGEEGASSKDEDNVAEYGSVGDVGADRDDVAEGNDIYPWWEEYDVVEGFGAFDDSSDGEGYYSESSPVFGE EERAEEDFDVYQDPVEVDDEGVADSSEDLEADSGADSVTDWEEEGDYLPNDGDVTTSSSAGKGAADDLSVDDSTFLDEGE EGGYKGIDKDSDGYRIPMSLPDSRSRYYDLGDFVSLR
Sequences:
>Translated_597_residues MLFFYISASSVSYMLRFVLSVVVLLILSSCGGKYAFEMSRNYAPPYNPGGDYFDDDESFAQSYEIYEKRREDALREQESM KKRNRGRDLQQKSGRRQISDEEKGRIINELQRYGVMYNAGERRKGGMVNSEGIDLSRVRGARFIDVDLNKSGVISGKEER VDESILVKTKEGELLDAEEQSSMLSGGLPGDSADEEHEEFEVNIDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVEEEQSP ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDSDCPTGAHKSHGGHKKLSHPVEVKEEQRPALDVISSELPKDDIAEDQE GIKVDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVKEEQRPALDVISSELPKDDIAEDQEGIGVKGGCNAGDDCPSDELNL EHGNKEVAVYGEEGASSKDEDNVAEYGSVGDVGADRDDVAEGNDIYPWWEEYDVVEGFGAFDDSSDGEGYYSESSPVFGE EERAEEDFDVYQDPVEVDDEGVADSSEDLEADSGADSVTDWEEEGDYLPNDGDVTTSSSAGKGAADDLSVDDSTFLDEGE EGGYKGIDKDSDGYRIPMSLPDSRSRYYDLGDFVSLR >Mature_597_residues MLFFYISASSVSYMLRFVLSVVVLLILSSCGGKYAFEMSRNYAPPYNPGGDYFDDDESFAQSYEIYEKRREDALREQESM KKRNRGRDLQQKSGRRQISDEEKGRIINELQRYGVMYNAGERRKGGMVNSEGIDLSRVRGARFIDVDLNKSGVISGKEER VDESILVKTKEGELLDAEEQSSMLSGGLPGDSADEEHEEFEVNIDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVEEEQSP ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDSDCPTGAHKSHGGHKKLSHPVEVKEEQRPALDVISSELPKDDIAEDQE GIKVDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVKEEQRPALDVISSELPKDDIAEDQEGIGVKGGCNAGDDCPSDELNL EHGNKEVAVYGEEGASSKDEDNVAEYGSVGDVGADRDDVAEGNDIYPWWEEYDVVEGFGAFDDSSDGEGYYSESSPVFGE EERAEEDFDVYQDPVEVDDEGVADSSEDLEADSGADSVTDWEEEGDYLPNDGDVTTSSSAGKGAADDLSVDDSTFLDEGE EGGYKGIDKDSDGYRIPMSLPDSRSRYYDLGDFVSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65210; Mature: 65210
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFYISASSVSYMLRFVLSVVVLLILSSCGGKYAFEMSRNYAPPYNPGGDYFDDDESFA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH QSYEIYEKRREDALREQESMKKRNRGRDLQQKSGRRQISDEEKGRIINELQRYGVMYNAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEECCC ERRKGGMVNSEGIDLSRVRGARFIDVDLNKSGVISGKEERVDESILVKTKEGELLDAEEQ CCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCEECCHHH SSMLSGGLPGDSADEEHEEFEVNIDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVEEEQSP HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDSDCPTGAHKSHGGHKKLSHPVEVKEEQR HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCC PALDVISSELPKDDIAEDQEGIKVDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVKEEQRP HHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCH ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDCPSDELNLEHGNKEVAVYGEEGASSKDE HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DNVAEYGSVGDVGADRDDVAEGNDIYPWWEEYDVVEGFGAFDDSSDGEGYYSESSPVFGE CHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCC EERAEEDFDVYQDPVEVDDEGVADSSEDLEADSGADSVTDWEEEGDYLPNDGDVTTSSSA HHHCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC GKGAADDLSVDDSTFLDEGEEGGYKGIDKDSDGYRIPMSLPDSRSRYYDLGDFVSLR CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCHHEECC >Mature Secondary Structure MLFFYISASSVSYMLRFVLSVVVLLILSSCGGKYAFEMSRNYAPPYNPGGDYFDDDESFA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH QSYEIYEKRREDALREQESMKKRNRGRDLQQKSGRRQISDEEKGRIINELQRYGVMYNAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEECCC ERRKGGMVNSEGIDLSRVRGARFIDVDLNKSGVISGKEERVDESILVKTKEGELLDAEEQ CCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCEECCHHH SSMLSGGLPGDSADEEHEEFEVNIDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVEEEQSP HHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDSDCPTGAHKSHGGHKKLSHPVEVKEEQR HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCC PALDVISSELPKDDIAEDQEGIKVDCDCGDDCDCPTGAHKSHGGHKKLSHPVEVKEEQRP HHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCH ALDVISSELPKDDIAEDQEGIGVKGGCNAGDDCPSDELNLEHGNKEVAVYGEEGASSKDE HHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DNVAEYGSVGDVGADRDDVAEGNDIYPWWEEYDVVEGFGAFDDSSDGEGYYSESSPVFGE CHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCC EERAEEDFDVYQDPVEVDDEGVADSSEDLEADSGADSVTDWEEEGDYLPNDGDVTTSSSA HHHCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC GKGAADDLSVDDSTFLDEGEEGGYKGIDKDSDGYRIPMSLPDSRSRYYDLGDFVSLR CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA