Definition | Anaplasma phagocytophilum HZ, complete genome. |
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Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is 88607006
Identifier: 88607006
GI number: 88607006
Start: 1104862
End: 1104966
Strand: Reverse
Name: 88607006
Synonym: APH_1041
Alternate gene names: NA
Gene position: 1104966-1104862 (Counterclockwise)
Preceding gene: 88607691
Following gene: 88607199
Centisome position: 75.1
GC content: 41.9
Gene sequence:
>105_bases GTGAATTCGCTTGTATTGCAGTGTAATATTAAGTTCTGTGTAGAATTTGGTAGGGATATGGAGCCTCAGCACAATTCTGC GTGCATAGCGTATGTGTGCGTATGA
Upstream 100 bases:
>100_bases ACAAGTGCTACAGTAGTATGAGTCAAATTCTTTACCGAGCATAGCAATTGTGGCTATAGTACTGAGAGAACCTCTTTTAA GGAGAGCAATGTGATAGAGG
Downstream 100 bases:
>100_bases TCTCTGTTACAAGCTCAGACTCGGTTTTTAAATCGCTAAAGCCTTAACAAGCGCTACATCATGGTGCTTCAAATTCTCTA CTGAGAATAACAATTAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 34; Mature: 34
Protein sequence:
>34_residues MNSLVLQCNIKFCVEFGRDMEPQHNSACIAYVCV
Sequences:
>Translated_34_residues MNSLVLQCNIKFCVEFGRDMEPQHNSACIAYVCV >Mature_34_residues MNSLVLQCNIKFCVEFGRDMEPQHNSACIAYVCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3864; Mature: 3864
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.8 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 17.6 %Cys+Met (Translated Protein) 11.8 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 17.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLVLQCNIKFCVEFGRDMEPQHNSACIAYVCV CCCEEEEECEEEEEECCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MNSLVLQCNIKFCVEFGRDMEPQHNSACIAYVCV CCCEEEEECEEEEEECCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA