| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88606997
Identifier: 88606997
GI number: 88606997
Start: 516423
End: 516548
Strand: Direct
Name: 88606997
Synonym: APH_0488
Alternate gene names: NA
Gene position: 516423-516548 (Clockwise)
Preceding gene: 88606933
Following gene: 88607387
Centisome position: 35.1
GC content: 34.92
Gene sequence:
>126_bases ATGTGTGTGACTTGTTATCCAAAATTTCAACAGTTCACATATCGCACTCCATATGAGTGTGGTATACCAAAAGGAGATGT TTGTGCTTTATTTAATTTGCTTGGGGATGATTCTTCTGCATATTAA
Upstream 100 bases:
>100_bases TGTAGAGAATGGAAATGCAGAGGGGAGAGAAATTGCAAATGGTATAAGTGCATAGCTTGTTTCCATCTCTAATAAGAGAA AACGAGAGGATCTCAAGTAG
Downstream 100 bases:
>100_bases AAGGCAAGAGGGCTGTCTTCTGATTCGGGATTGAAGTTTTTCAGCCACTTCTTCGAAGTGTGCAGATGGCTTTCAATCCC GGTCTCCTTTTGTTTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 41
Protein sequence:
>41_residues MCVTCYPKFQQFTYRTPYECGIPKGDVCALFNLLGDDSSAY
Sequences:
>Translated_41_residues MCVTCYPKFQQFTYRTPYECGIPKGDVCALFNLLGDDSSAY >Mature_41_residues MCVTCYPKFQQFTYRTPYECGIPKGDVCALFNLLGDDSSAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4646; Mature: 4646
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 9.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVTCYPKFQQFTYRTPYECGIPKGDVCALFNLLGDDSSAY CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MCVTCYPKFQQFTYRTPYECGIPKGDVCALFNLLGDDSSAY CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA