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The map label for this gene is 88606876

Identifier: 88606876

GI number: 88606876

Start: 250430

End: 250708

Strand: Direct

Name: 88606876

Synonym: APH_0250

Alternate gene names: NA

Gene position: 250430-250708 (Clockwise)

Preceding gene: 88607946

Following gene: 88607710

Centisome position: 17.02

GC content: 37.99

Gene sequence:

>279_bases
TTGTATCGAAACCACAAGTCGTCTCTAAGTAGTCTGCAAATCGTACTACAAACTGCCATAGCACTCTTCTCACCCATCAT
ACCGCACGTAACTCATTATATAAGTAGTAATAGTGAAACAGAAAGTCCAAAGTGGCCATTATACGAAGAAATACCACGTT
ATGAAGCCATAGAACAAATGTGCGAGGAAGCAATGAGAATAGTTCACGAGATTAGACGTTATAAGTCAGAAAATTGTATC
GCCATGAACCATCCCCTTAATATACTTTACTATATCTAG

Upstream 100 bases:

>100_bases
TGGTATTCCTGTCCTATAACTAACTATCGCGCCATGAGGATACCCTACAATGTTTACGCGCTTCTAAGCCTATCCTATAA
AGGGCTTGTTGGTAGAATAA

Downstream 100 bases:

>100_bases
CAAAACGATAAAACAGGCCATATCCCCTTTAATCTTGGCACGAGGAGTTAAAGTAGCGACAGAATCCACAACAAAACGTT
TAACCAAAGTTCACAAGATG

Product: valyl-tRNA synthetase, truncation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MYRNHKSSLSSLQIVLQTAIALFSPIIPHVTHYISSNSETESPKWPLYEEIPRYEAIEQMCEEAMRIVHEIRRYKSENCI
AMNHPLNILYYI

Sequences:

>Translated_92_residues
MYRNHKSSLSSLQIVLQTAIALFSPIIPHVTHYISSNSETESPKWPLYEEIPRYEAIEQMCEEAMRIVHEIRRYKSENCI
AMNHPLNILYYI
>Mature_92_residues
MYRNHKSSLSSLQIVLQTAIALFSPIIPHVTHYISSNSETESPKWPLYEEIPRYEAIEQMCEEAMRIVHEIRRYKSENCI
AMNHPLNILYYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10882; Mature: 10882

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRNHKSSLSSLQIVLQTAIALFSPIIPHVTHYISSNSETESPKWPLYEEIPRYEAIEQM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHH
CEEAMRIVHEIRRYKSENCIAMNHPLNILYYI
HHHHHHHHHHHHHHCCCCCEEECCCCEEEEEC
>Mature Secondary Structure
MYRNHKSSLSSLQIVLQTAIALFSPIIPHVTHYISSNSETESPKWPLYEEIPRYEAIEQM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHH
CEEAMRIVHEIRRYKSENCIAMNHPLNILYYI
HHHHHHHHHHHHHHCCCCCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA