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The map label for this gene is ybeB [H]

Identifier: 88606809

GI number: 88606809

Start: 203332

End: 203715

Strand: Reverse

Name: ybeB [H]

Synonym: APH_0207

Alternate gene names: 88606809

Gene position: 203715-203332 (Counterclockwise)

Preceding gene: 88607219

Following gene: 88606881

Centisome position: 13.85

GC content: 38.8

Gene sequence:

>384_bases
GTGTTTACATCTACAGAAAATCTGAAGGATTTGGTAGTTGCAGTGTTGGATGAGCACAGTGCTCGCGATATTGCTGCACT
TGATGTTCGTGATAGATGTCAGCTAACTGAGTACATCATTATTTCTTCTGGAAACTCCACAAGTCACGTAAAGGCTTTAG
CAGAACATGTGAAGAAAAAAGTCGCACATTATAGCAAGAAACATATAGAAGGGTTGGATGAAGGTAATTGGGTAGTCATT
ACTCTAAACAATGTCATAGTACACATATTTCGTGAAGAAGTACGTGAATATTACAAGCTAGAAGATCTCTGGAGTAAGAA
TCTTGCTAATGCTAACCTCGTGCAGGGGAAAAAACCTAATGATGTCTTGGATGACACACTATAG

Upstream 100 bases:

>100_bases
GCAGTCAAAGACCTACAAATTCTAGGTAGCACTGTTAACTCTTTTATTATGTGAAAATGCCAGGTAACATGAACAGAGAT
ACAGTACATTAGAGGACGTT

Downstream 100 bases:

>100_bases
ATTTCTCTTTGCTCACCAATTTGTTCGTCGTGCTGCAAGCAGTATTCCCGCAATTGTAGATGCTATACGAAGACGTATCC
GTACATGCTCATAGATCCCA

Product: iojap-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFTSTENLKDLVVAVLDEHSARDIAALDVRDRCQLTEYIIISSGNSTSHVKALAEHVKKKVAHYSKKHIEGLDEGNWVVI
TLNNVIVHIFREEVREYYKLEDLWSKNLANANLVQGKKPNDVLDDTL

Sequences:

>Translated_127_residues
MFTSTENLKDLVVAVLDEHSARDIAALDVRDRCQLTEYIIISSGNSTSHVKALAEHVKKKVAHYSKKHIEGLDEGNWVVI
TLNNVIVHIFREEVREYYKLEDLWSKNLANANLVQGKKPNDVLDDTL
>Mature_127_residues
MFTSTENLKDLVVAVLDEHSARDIAALDVRDRCQLTEYIIISSGNSTSHVKALAEHVKKKVAHYSKKHIEGLDEGNWVVI
TLNNVIVHIFREEVREYYKLEDLWSKNLANANLVQGKKPNDVLDDTL

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=121, Percent_Identity=33.8842975206612, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87081768, Length=100, Percent_Identity=39, Blast_Score=82, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 14457; Mature: 14457

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTSTENLKDLVVAVLDEHSARDIAALDVRDRCQLTEYIIISSGNSTSHVKALAEHVKKK
CCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHH
VAHYSKKHIEGLDEGNWVVITLNNVIVHIFREEVREYYKLEDLWSKNLANANLVQGKKPN
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DVLDDTL
CCCCCCC
>Mature Secondary Structure
MFTSTENLKDLVVAVLDEHSARDIAALDVRDRCQLTEYIIISSGNSTSHVKALAEHVKKK
CCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHH
VAHYSKKHIEGLDEGNWVVITLNNVIVHIFREEVREYYKLEDLWSKNLANANLVQGKKPN
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DVLDDTL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]