Click here to switch to the map view.

The map label for this gene is 88606793

Identifier: 88606793

GI number: 88606793

Start: 1065606

End: 1065746

Strand: Reverse

Name: 88606793

Synonym: APH_1006

Alternate gene names: NA

Gene position: 1065746-1065606 (Counterclockwise)

Preceding gene: 88607367

Following gene: 88607188

Centisome position: 72.44

GC content: 35.46

Gene sequence:

>141_bases
TTGCGTACGGTTGTTTTTATAGGATGTCATCCATTTCCAACCAGGAGAACTGTAGATAGAACAAAAGCATCTATATATGT
AGAAAGTAAGTCAGAAGGTGAGAAGAGTGCTAAAGATGTATACTATAATGCAGCATACTAA

Upstream 100 bases:

>100_bases
TTTCAGTGTGTTACTAGCGGTTTACGATAAGCATTGTTGCGCAAAGGTTCACAGTGCTTTTAAATCCAACGATCGATAAT
CTTGCTGCGGTTAGGTAGAC

Downstream 100 bases:

>100_bases
GATCTAGTTTGGTCTTCGGAAACGAAGACAAATTTCTTCAATAAGTTAGCGCACCTAGTGAGAGTAATCCCATTTATTTC
CCGTTAATAGGAGGAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MRTVVFIGCHPFPTRRTVDRTKASIYVESKSEGEKSAKDVYYNAAY

Sequences:

>Translated_46_residues
MRTVVFIGCHPFPTRRTVDRTKASIYVESKSEGEKSAKDVYYNAAY
>Mature_46_residues
MRTVVFIGCHPFPTRRTVDRTKASIYVESKSEGEKSAKDVYYNAAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5273; Mature: 5273

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVVFIGCHPFPTRRTVDRTKASIYVESKSEGEKSAKDVYYNAAY
CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRTVVFIGCHPFPTRRTVDRTKASIYVESKSEGEKSAKDVYYNAAY
CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA