Click here to switch to the map view.

The map label for this gene is 88606775

Identifier: 88606775

GI number: 88606775

Start: 230741

End: 231637

Strand: Direct

Name: 88606775

Synonym: APH_0233

Alternate gene names: NA

Gene position: 230741-231637 (Clockwise)

Preceding gene: 88607237

Following gene: 88607331

Centisome position: 15.68

GC content: 49.61

Gene sequence:

>897_bases
ATGGGCAAAAATCCGTTGCGTGACCGTGCGAAGAAAATTGCCGGGAAAACAGCAGATATTGGTCGTCGTGGCAGGTCGGC
TGTCTCTTCTGTAAAGAAAGCTGTCAGAGGTACGGCTGAAAATCTGTGTTGTGGTAGATCGGCTACGTCTCCCAGAAGGA
AGGTGACTACTGCCGGGTTTGTTGCTTTCTCGTGGTATGTCAGGGTCACAGGAGCTTTGTTACTGCTTCTGGTATCACCG
CTTATTTTGCTGTACCTGCTTTCTCTGCCACTAGCACATGCGTCACAGTATGCGTGGGCTAAGGTAGTATCAAGGCGTAG
GTGGAAGGAAGGTGAGCGTGTCCGTACTGGCAAGCTACATCGTCTCGTAGGGCCTGCGGCGCGTCAGGTATTTGTCTACA
TGCATACATTCCTGAGTAACGTGATATTTTTCGCATTGGTATTCCGTGCGGTAACGGCGGTTGTAGCTCCTACTACTATG
CCCCTGAAGGCAGCGTTTCTATATGCGTTAGCACCAGCTGCTGTCTTGTTGTTATGCTCTGTTGTGTTTCACTATCTTTC
TTCGGTTTACCGCCTGAAAGGTGGTTTGCCTCTTCGGTATAGTGCAAAGTTGCTATGGCGTAGCCCTGAAAAGACTTATG
ACAGGTGTGATGACTCCGTGTTGAATCTGACGTTTAGGGAGCAGATTCGCAGTGCGATGAGTATGACCTCTTTAGCAAGG
ATGGATCAGCAGTTACTGCTTGGGGTGCCTACTGCGCTTGTGGCTGTGGGCTGTTATTTGTTTGATCTGTGCACTGGTCA
GGAAAAGGAAGCTGCTGAAGTTCGTGAAGAGGCGAGCACCTACTTCACAGGGATATCTGTTGACTGGAAGGTGAACGCGG
GTCTCTTTAAAGCATAA

Upstream 100 bases:

>100_bases
TTTTCCGGAACCGAACGTTTCAGCGTTCAATTCAGAATTTGATTTTGGTTGTGCAAAAGTATATATTTAAAGCAATGAGT
GTGTGTTCAGGGTTTAGCTT

Downstream 100 bases:

>100_bases
TCTGTCAAGAAAAAAAGTATTTTTGGAACTGCTGCAGCATGTAGGAGGCTGCTGTACGGTATCCTCGTGTTTTATGAGTG
TAGTTTGGTGCTTTTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MGKNPLRDRAKKIAGKTADIGRRGRSAVSSVKKAVRGTAENLCCGRSATSPRRKVTTAGFVAFSWYVRVTGALLLLLVSP
LILLYLLSLPLAHASQYAWAKVVSRRRWKEGERVRTGKLHRLVGPAARQVFVYMHTFLSNVIFFALVFRAVTAVVAPTTM
PLKAAFLYALAPAAVLLLCSVVFHYLSSVYRLKGGLPLRYSAKLLWRSPEKTYDRCDDSVLNLTFREQIRSAMSMTSLAR
MDQQLLLGVPTALVAVGCYLFDLCTGQEKEAAEVREEASTYFTGISVDWKVNAGLFKA

Sequences:

>Translated_298_residues
MGKNPLRDRAKKIAGKTADIGRRGRSAVSSVKKAVRGTAENLCCGRSATSPRRKVTTAGFVAFSWYVRVTGALLLLLVSP
LILLYLLSLPLAHASQYAWAKVVSRRRWKEGERVRTGKLHRLVGPAARQVFVYMHTFLSNVIFFALVFRAVTAVVAPTTM
PLKAAFLYALAPAAVLLLCSVVFHYLSSVYRLKGGLPLRYSAKLLWRSPEKTYDRCDDSVLNLTFREQIRSAMSMTSLAR
MDQQLLLGVPTALVAVGCYLFDLCTGQEKEAAEVREEASTYFTGISVDWKVNAGLFKA
>Mature_297_residues
GKNPLRDRAKKIAGKTADIGRRGRSAVSSVKKAVRGTAENLCCGRSATSPRRKVTTAGFVAFSWYVRVTGALLLLLVSPL
ILLYLLSLPLAHASQYAWAKVVSRRRWKEGERVRTGKLHRLVGPAARQVFVYMHTFLSNVIFFALVFRAVTAVVAPTTMP
LKAAFLYALAPAAVLLLCSVVFHYLSSVYRLKGGLPLRYSAKLLWRSPEKTYDRCDDSVLNLTFREQIRSAMSMTSLARM
DQQLLLGVPTALVAVGCYLFDLCTGQEKEAAEVREEASTYFTGISVDWKVNAGLFKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32972; Mature: 32841

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure 
GKNPLRDRAKKIAGKTADIGRRGRSAVSSVKKAVRGTAENLCCGRSATSPRRKVTTAGF
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
VAFSWYVRVTGALLLLLVSPLILLYLLSLPLAHASQYAWAKVVSRRRWKEGERVRTGKLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RLVGPAARQVFVYMHTFLSNVIFFALVFRAVTAVVAPTTMPLKAAFLYALAPAAVLLLCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VVFHYLSSVYRLKGGLPLRYSAKLLWRSPEKTYDRCDDSVLNLTFREQIRSAMSMTSLAR
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MDQQLLLGVPTALVAVGCYLFDLCTGQEKEAAEVREEASTYFTGISVDWKVNAGLFKA
HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA