| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88606768
Identifier: 88606768
GI number: 88606768
Start: 217459
End: 217740
Strand: Reverse
Name: 88606768
Synonym: APH_0219
Alternate gene names: NA
Gene position: 217740-217459 (Counterclockwise)
Preceding gene: 88607625
Following gene: 88607749
Centisome position: 14.8
GC content: 47.16
Gene sequence:
>282_bases TTGACATTCTTGTATGGTGCTTATAGAATTCCTAAGGCGTTGGCGAGTTGGATTTGCATGCTTTTTTCCCTGTTGCGTGG TTGTACTAGGATTGGCATAACCGTCCTGGGTGGGGCTTGCGGTGTTCTCGCCATGAGTAGAGGTGTACTAAAGGAGCACA TGAAGTCTTCTCTGAAGGAAATGGGCTTTGTGTGCAGAGAGGAGTTTGATGCCCTAGACGAGTGCTTTAGGCGCTTTCAG GCTTCCAAGGAGAAACAAAGTCATCAGCGTGATAAGGAATAA
Upstream 100 bases:
>100_bases TACGTTCTGTCTTTTTGTAACGTGTCCATATTGTAGGTACAGTGGTAAGTTGTAATAGCCCCCTTGTTGTCGCACCATAA ATGGCATCGCTTTATGGCGG
Downstream 100 bases:
>100_bases TTGGACTCTTGAAGAAACGTTAGAGCTCTTTGGCCTACCGTTTAATGATTTGCTATTCAAGGCTCATATGGTGCATAGGG AGTACTTTCGTCACAACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTFLYGAYRIPKALASWICMLFSLLRGCTRIGITVLGGACGVLAMSRGVLKEHMKSSLKEMGFVCREEFDALDECFRRFQ ASKEKQSHQRDKE
Sequences:
>Translated_93_residues MTFLYGAYRIPKALASWICMLFSLLRGCTRIGITVLGGACGVLAMSRGVLKEHMKSSLKEMGFVCREEFDALDECFRRFQ ASKEKQSHQRDKE >Mature_92_residues TFLYGAYRIPKALASWICMLFSLLRGCTRIGITVLGGACGVLAMSRGVLKEHMKSSLKEMGFVCREEFDALDECFRRFQA SKEKQSHQRDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10585; Mature: 10453
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLYGAYRIPKALASWICMLFSLLRGCTRIGITVLGGACGVLAMSRGVLKEHMKSSLKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGFVCREEFDALDECFRRFQASKEKQSHQRDKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TFLYGAYRIPKALASWICMLFSLLRGCTRIGITVLGGACGVLAMSRGVLKEHMKSSLKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGFVCREEFDALDECFRRFQASKEKQSHQRDKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA