Definition | Methanospirillum hungatei JF-1 chromosome, complete genome. |
---|---|
Accession | NC_007796 |
Length | 3,544,738 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 88604174
GI number:
Start: 3214633
End: 3215922
Strand: Reverse
Name: Not Available
Synonym: Mhun_2941
Alternate gene names: NA
Gene position: NA
Preceding gene: 88604175
Following gene: 88604173
Centisome position: NA
GC content: NA
Gene sequence:
>1290_bases GTGGTCAGGTATCACTATGCCCTGGTCGACGACCTGATCAGCAGGGAAGAGTTCGACCGTCTGATAGAGAAGAAGATAGC TGACTGTGGAAACCTCGCAGATGAGACCACGGCAGCCCTGCTGGTAGTAAAAGATCTTGGCCGGTCCCATGTCAAGATTC GAGGTCTGCGGGGGAAGTCCTCCCTCTTCTGTTTTTATGCAAAGATCATTGCCTTCTCTGGTGTCAGGGAGTTTGACCGC CCTGAGGGGGAGAAGGGTTTGGTTGCACGACTGACGGTGGCAGACGAGACCGGACAGGTTGAACTGGTCTTCTGGGATGA GCAGGCTGCAGCCCTTGAAGAGACCTTTGAGATAGGCGACGTGGTCGAGATCATCGGCCGGCATGGAAAATCCATCCGGG AGATTATGCCGCTGAATTTGCGGAAAACCTGTGTGGACATCGATTGTGTGATGGAGGTGAAAGAGCGGAAGGCCCCTGAG CGCACAGACCTGCACCTTCTCGTCATCAGTCTTGCCGAGCCCCGTCCCTTTACCCGCCGGGATGGTACCAGCGGCGAGAT GGTGAGTGGTCTTGTCGGTGATACAAACGGGACTGCACGGTTTATCTGCTGGGAGCCTGCCCTGTTATCTGGAATATCTC CGGGGATGGCTGTATCGGTGACCGGTGCCCTGACGAAGGAGGGAGACTATGGAGGACGGGAGATTGTGTGTGATGAAGAG ACCTTCATCGCCCAGGCAGATACATCCCCAGATATCCCGGTAACAGCGCTTGATCATATCGCTCCTGAAACGAGCTGTAC TGTCCGGGGCACAATAACAAAGATCCTGCCGGCAAAACCCTTTACCAAGCGGGATGGAACAACGTCCTTTGTCCGTAACC TCCGGTTTTCTGATGGAACTGCCGATGTCCCTCTGGTTCTTTGGGATGTTGAGGCAAAACGAACGCTCCTCCCCGGTGAG ACGATCATACTCTATAATGCCTATACAAAAGTTGGAAGATCCGGTGAAATTGAGGTCTCTCTAGGGAGAGGGGGCGCTCT CACCGTTATTCCCGATAAGGAAGAGCCGGTCAGGATTGAAGGATGGATACTGCATGTACCGGAGGGGATAGTCATTACAA ACCGGGAGGGATCATGGCTGGTGGAGACCCGTCTCCCCCATGGGTCACATGTCATTATGACCGGTCGGGCGAGTGGAAAA AGGGTCTTCTGCGAAAGTGAAGAGGTGGTAAAAGAAGACCTTGAAGGGTTGAAGAATGCGGTTTCCTCCTTCATACGGTC GTTTTCATAA
Upstream 100 bases:
>100_bases GAAGGGACAGGCAGAACTGATGCGAAGGGCAGAGACCATTGATGATCTGATGGCAAACCTCGAGACCCCTTCATGGCTCA GATAATGCCGGAGTGAACCG
Downstream 100 bases:
>100_bases ATGCCATTTTCACTTTCACCCCGTTTATTTTAGACTTAAATACCCCTCGCTGCCACCTGTATGATGAGGAAACTACTATG GCAGCAGAAACATACAAACT
Product: nucleic acid binding, OB-fold, tRNA/helicase-type
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>429_residues MVRYHYALVDDLISREEFDRLIEKKIADCGNLADETTAALLVVKDLGRSHVKIRGLRGKSSLFCFYAKIIAFSGVREFDR PEGEKGLVARLTVADETGQVELVFWDEQAAALEETFEIGDVVEIIGRHGKSIREIMPLNLRKTCVDIDCVMEVKERKAPE RTDLHLLVISLAEPRPFTRRDGTSGEMVSGLVGDTNGTARFICWEPALLSGISPGMAVSVTGALTKEGDYGGREIVCDEE TFIAQADTSPDIPVTALDHIAPETSCTVRGTITKILPAKPFTKRDGTTSFVRNLRFSDGTADVPLVLWDVEAKRTLLPGE TIILYNAYTKVGRSGEIEVSLGRGGALTVIPDKEEPVRIEGWILHVPEGIVITNREGSWLVETRLPHGSHVIMTGRASGK RVFCESEEVVKEDLEGLKNAVSSFIRSFS
Sequences:
NA
Specific function: NA
COG id: COG1599
COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA