Click here to switch to the map view.

The map label for this gene is wxcX [H]

Identifier: 87201246

GI number: 87201246

Start: 3455384

End: 3456517

Strand: Direct

Name: wxcX [H]

Synonym: Saro_3234

Alternate gene names: 87201246

Gene position: 3455384-3456517 (Clockwise)

Preceding gene: 87201242

Following gene: 87201258

Centisome position: 97.02

GC content: 64.46

Gene sequence:

>1134_bases
ATGAACGCGAACAACCGGACCGGCGACGTCAAGGCAATCGCCATTCACCTTCCGCAGTTCCATCCCGTCCCGGAAAACGA
CGCCTGGTGGGGCAAGGGCTTCACGGAATGGACCAACGTCACCAAGGCCCGACCACTGTTTCCCGGCCATCCCCAGCCGC
ACCTGCCGTCAGACCTTGGCTTCTACGATATGCGCTTGCCGGAAACGCGCGCGGCGCAGGCCGAGCTGGCCCGGCAGTAC
GGCATATCGGCCTTCTGCTATTATCACTACTGGTTCGGCGGCAAGCGCATCCTCGAGCGTCCGGTGAACGACATCGTCGC
CTCGGGAGAGCCCGACTTTCCGTTCTGCCTGTGCTGGGCGAACGAGAACTGGACAAGAACCTGGGACGGCAAGGATTCAG
CGGTCCTGCTCGCCCAGAACTACGGGCCTGACGACGATCTGGCCCATTTCCGCGAACTTCTGCCGATCTTCTCCGACCCC
AGATACTTGCGCATCGATGGCAAGGTCGCCTTCTTCGTCTATCGACCCGACCAGCTTCCCGATGCCCGATCGACAGTCGC
GATCTGGCGCGAAGAGGCGCGCAAGGCGGGTCTTGGAGAACTGTTCCTCGGCGCTTTCATGACTTCGGCGTTCGACGTCG
AGGCTAGCGGCTTCGACGTGGCCGTGGAATTTGCTCCAAACAAGTTCAGCCCGCCGCAGGCTTCGGGATTTCGGCGTCTG
CTGACCCGTGCATGGTGCCGTATCTTCGCTCGCCTGCGCGGTACCCGGCAGGCCGCGATCCATCTCTACGACGATCTCGC
GCGCGGCATGACCGAAAGCCCGCCCCCGGCCGGCGTTTCGCCCGACCGCTGGCTGCGCTGCGTCACGCCCGGCTGGGACA
ATTCGGCCCGCAAGAAGAACCGCCCGCTGATCTTCGTCGGCTCCACGCCGGAACGCTACGGGCGGTGGCTGCGCGAAATG
GTGGCGTGGACACGCCGCAACGCCCCGCCAGAGCGCCGCTTCATCTTCATCAATGCCTGGAACGAATGGGCCGAGGGCAA
CCACCTCGAACCCGACCAGCGCAACGGTCACGCCAATCTAGAGGCGACCGCCCGCGCACTCGACGAAGGCAACCGCGACG
CGGCGAATGGCTAG

Upstream 100 bases:

>100_bases
CCCCGTGCGCCCAATTGCAGTCGGAAACTCTATGGGTTTTTCCGGAGGCGTGTGCTAGCCCCATTTTGCAGCGCAGCAGA
CGGGTTGTCCCGAAGGAAAC

Downstream 100 bases:

>100_bases
ACCGGCCCGATCGGGAACCGGTCCAGCCGGGCAGATCAGCCGCGATCCTTGAGCGGCCGCCACCACGCTTCGTTGTCGAA
GTACCAGCGCAGGGTGCCGC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNANNRTGDVKAIAIHLPQFHPVPENDAWWGKGFTEWTNVTKARPLFPGHPQPHLPSDLGFYDMRLPETRAAQAELARQY
GISAFCYYHYWFGGKRILERPVNDIVASGEPDFPFCLCWANENWTRTWDGKDSAVLLAQNYGPDDDLAHFRELLPIFSDP
RYLRIDGKVAFFVYRPDQLPDARSTVAIWREEARKAGLGELFLGAFMTSAFDVEASGFDVAVEFAPNKFSPPQASGFRRL
LTRAWCRIFARLRGTRQAAIHLYDDLARGMTESPPPAGVSPDRWLRCVTPGWDNSARKKNRPLIFVGSTPERYGRWLREM
VAWTRRNAPPERRFIFINAWNEWAEGNHLEPDQRNGHANLEATARALDEGNRDAANG

Sequences:

>Translated_377_residues
MNANNRTGDVKAIAIHLPQFHPVPENDAWWGKGFTEWTNVTKARPLFPGHPQPHLPSDLGFYDMRLPETRAAQAELARQY
GISAFCYYHYWFGGKRILERPVNDIVASGEPDFPFCLCWANENWTRTWDGKDSAVLLAQNYGPDDDLAHFRELLPIFSDP
RYLRIDGKVAFFVYRPDQLPDARSTVAIWREEARKAGLGELFLGAFMTSAFDVEASGFDVAVEFAPNKFSPPQASGFRRL
LTRAWCRIFARLRGTRQAAIHLYDDLARGMTESPPPAGVSPDRWLRCVTPGWDNSARKKNRPLIFVGSTPERYGRWLREM
VAWTRRNAPPERRFIFINAWNEWAEGNHLEPDQRNGHANLEATARALDEGNRDAANG
>Mature_377_residues
MNANNRTGDVKAIAIHLPQFHPVPENDAWWGKGFTEWTNVTKARPLFPGHPQPHLPSDLGFYDMRLPETRAAQAELARQY
GISAFCYYHYWFGGKRILERPVNDIVASGEPDFPFCLCWANENWTRTWDGKDSAVLLAQNYGPDDDLAHFRELLPIFSDP
RYLRIDGKVAFFVYRPDQLPDARSTVAIWREEARKAGLGELFLGAFMTSAFDVEASGFDVAVEFAPNKFSPPQASGFRRL
LTRAWCRIFARLRGTRQAAIHLYDDLARGMTESPPPAGVSPDRWLRCVTPGWDNSARKKNRPLIFVGSTPERYGRWLREM
VAWTRRNAPPERRFIFINAWNEWAEGNHLEPDQRNGHANLEATARALDEGNRDAANG

Specific function: Unknown

COG id: COG3754

COG function: function code M; Lipopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007739 [H]

Pfam domain/function: PF05045 RgpF [H]

EC number: NA

Molecular weight: Translated: 43019; Mature: 43019

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANNRTGDVKAIAIHLPQFHPVPENDAWWGKGFTEWTNVTKARPLFPGHPQPHLPSDLG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
FYDMRLPETRAAQAELARQYGISAFCYYHYWFGGKRILERPVNDIVASGEPDFPFCLCWA
EEEECCCCHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCHHHHHCCCCCCCCEEEEEE
NENWTRTWDGKDSAVLLAQNYGPDDDLAHFRELLPIFSDPRYLRIDGKVAFFVYRPDQLP
CCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCC
DARSTVAIWREEARKAGLGELFLGAFMTSAFDVEASGFDVAVEFAPNKFSPPQASGFRRL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCHHHHHHH
LTRAWCRIFARLRGTRQAAIHLYDDLARGMTESPPPAGVSPDRWLRCVTPGWDNSARKKN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCHHCC
RPLIFVGSTPERYGRWLREMVAWTRRNAPPERRFIFINAWNEWAEGNHLEPDQRNGHANL
CCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH
EATARALDEGNRDAANG
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNANNRTGDVKAIAIHLPQFHPVPENDAWWGKGFTEWTNVTKARPLFPGHPQPHLPSDLG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
FYDMRLPETRAAQAELARQYGISAFCYYHYWFGGKRILERPVNDIVASGEPDFPFCLCWA
EEEECCCCHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCHHHHHCCCCCCCCEEEEEE
NENWTRTWDGKDSAVLLAQNYGPDDDLAHFRELLPIFSDPRYLRIDGKVAFFVYRPDQLP
CCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCC
DARSTVAIWREEARKAGLGELFLGAFMTSAFDVEASGFDVAVEFAPNKFSPPQASGFRRL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCHHHHHHH
LTRAWCRIFARLRGTRQAAIHLYDDLARGMTESPPPAGVSPDRWLRCVTPGWDNSARKKN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCHHCC
RPLIFVGSTPERYGRWLREMVAWTRRNAPPERRFIFINAWNEWAEGNHLEPDQRNGHANL
CCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH
EATARALDEGNRDAANG
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]