Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87201228
Identifier: 87201228
GI number: 87201228
Start: 3433719
End: 3434150
Strand: Direct
Name: 87201228
Synonym: Saro_3216
Alternate gene names: NA
Gene position: 3433719-3434150 (Clockwise)
Preceding gene: 87201227
Following gene: 87201229
Centisome position: 96.41
GC content: 66.9
Gene sequence:
>432_bases ATGTACGCCGGCGGCGGCAGCGGCGGCGTGGCCCGCGCGCTCTCGGAAGTCGACGTATCGGCAATCGAAGGCCAATCGGG ATGGCTGGTGCGCAATGCGCTTGTCGACCGGCTCGGCGCGGGCCAGCACGATGGCGGCGCACACTACCGGCTGGACGTGC GGCTGGACGACCGGGTCGAAGGGCTTGGCCAGCTTTCCAACGACACGATCACGCGCGAACGGCGGACGCTGCGCGCGCGC TATCAACTGGTCGACGTGCAGAGCGGCGCGATCGTGCTGGACGCGACGGCGGGATCCGACGCAGGATTCGACGTGGTGAA CAGCGAATACGCTGTGATCGCCGCGGAACAGACGGCGCTCGAGAACCTTTCGCAGGAAATTGCTGACCAGATCGTCACGC GCGTCTCGCTTCGCCTTCGCGAGGCGAAATGA
Upstream 100 bases:
>100_bases ATCGTCGTGCCCGACCGTCTGGTGAACCTTGTCGCCTGAGCGCTTTGTCCTGATCCTCGCGCCCCTCGCCATGGCGCTGG GTAGCTGCGGCCTGCAGCCG
Downstream 100 bases:
>100_bases CGCGACGGCCGTGAAACTTACCCAGAAGACATTCCCCGGCAGCGCCGCCCGCGCCGCGAAGGAGTGCCGGATCTTCTATT TCTGCGGCCCGGACGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MYAGGGSGGVARALSEVDVSAIEGQSGWLVRNALVDRLGAGQHDGGAHYRLDVRLDDRVEGLGQLSNDTITRERRTLRAR YQLVDVQSGAIVLDATAGSDAGFDVVNSEYAVIAAEQTALENLSQEIADQIVTRVSLRLREAK
Sequences:
>Translated_143_residues MYAGGGSGGVARALSEVDVSAIEGQSGWLVRNALVDRLGAGQHDGGAHYRLDVRLDDRVEGLGQLSNDTITRERRTLRAR YQLVDVQSGAIVLDATAGSDAGFDVVNSEYAVIAAEQTALENLSQEIADQIVTRVSLRLREAK >Mature_143_residues MYAGGGSGGVARALSEVDVSAIEGQSGWLVRNALVDRLGAGQHDGGAHYRLDVRLDDRVEGLGQLSNDTITRERRTLRAR YQLVDVQSGAIVLDATAGSDAGFDVVNSEYAVIAAEQTALENLSQEIADQIVTRVSLRLREAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15282; Mature: 15282
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAGGGSGGVARALSEVDVSAIEGQSGWLVRNALVDRLGAGQHDGGAHYRLDVRLDDRVE CCCCCCCCHHHHHHHHCCHHEECCCCCEEHHHHHHHHHCCCCCCCCCEEEEEEEECCHHH GLGQLSNDTITRERRTLRARYQLVDVQSGAIVLDATAGSDAGFDVVNSEYAVIAAEQTAL HHHCCCCCHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCCEECCCCEEEEEEHHHHH ENLSQEIADQIVTRVSLRLREAK HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYAGGGSGGVARALSEVDVSAIEGQSGWLVRNALVDRLGAGQHDGGAHYRLDVRLDDRVE CCCCCCCCHHHHHHHHCCHHEECCCCCEEHHHHHHHHHCCCCCCCCCEEEEEEEECCHHH GLGQLSNDTITRERRTLRARYQLVDVQSGAIVLDATAGSDAGFDVVNSEYAVIAAEQTAL HHHCCCCCHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCCEECCCCEEEEEEHHHHH ENLSQEIADQIVTRVSLRLREAK HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA