Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200938
Identifier: 87200938
GI number: 87200938
Start: 3142610
End: 3142897
Strand: Direct
Name: 87200938
Synonym: Saro_2926
Alternate gene names: NA
Gene position: 3142610-3142897 (Clockwise)
Preceding gene: 87200933
Following gene: 87200939
Centisome position: 88.24
GC content: 73.26
Gene sequence:
>288_bases GTGGAACAAAGGACCAGGACCGGAATGGCCCAGATTGACGACATTTTGGGAGCCCTCGGCACTTCGCCGCCGCCCCCGGC GCTCGCCGCCATCGACGATGGCGTGTTGCGTGGCCTTGCCGACCGGCGCGAAAGCGCGACGGCGCGCCGCGGCATGGTGA TGGCGGTTGCGGTCGCGGCGTTCGTGGGGATCGCCGGTGCCATCGCCCCCGCCGCCCCCGCCCGCGCACAGGCGGAGCCG CTGTTCGGCGTGCCCTCCGGGGCGCCCTCGCACCTTCTGGCGGACTGA
Upstream 100 bases:
>100_bases GGATCTGGGAAGAGATACGCAAGGGCCGGCGCTTTCCCTCACCAGTGGCCGCAAAAATCTTCTTGAGGGATTTTGCGCGC GGGCGCGTATTAGGCAACGC
Downstream 100 bases:
>100_bases TGGGCCAGTCGCTGCGCTATGTGCTCGTGGCGGTGGTCTCGGCTGCGGTGGCGCTTGCCGCCAGCCACCTGGCTCGCGGC TGGATGCCGGCGCGCCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MEQRTRTGMAQIDDILGALGTSPPPPALAAIDDGVLRGLADRRESATARRGMVMAVAVAAFVGIAGAIAPAAPARAQAEP LFGVPSGAPSHLLAD
Sequences:
>Translated_95_residues MEQRTRTGMAQIDDILGALGTSPPPPALAAIDDGVLRGLADRRESATARRGMVMAVAVAAFVGIAGAIAPAAPARAQAEP LFGVPSGAPSHLLAD >Mature_95_residues MEQRTRTGMAQIDDILGALGTSPPPPALAAIDDGVLRGLADRRESATARRGMVMAVAVAAFVGIAGAIAPAAPARAQAEP LFGVPSGAPSHLLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9513; Mature: 9513
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRTRTGMAQIDDILGALGTSPPPPALAAIDDGVLRGLADRRESATARRGMVMAVAVAA CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGIAGAIAPAAPARAQAEPLFGVPSGAPSHLLAD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEQRTRTGMAQIDDILGALGTSPPPPALAAIDDGVLRGLADRRESATARRGMVMAVAVAA CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGIAGAIAPAAPARAQAEPLFGVPSGAPSHLLAD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA