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The map label for this gene is yfhM [H]

Identifier: 87200929

GI number: 87200929

Start: 3135294

End: 3136181

Strand: Direct

Name: yfhM [H]

Synonym: Saro_2917

Alternate gene names: 87200929

Gene position: 3135294-3136181 (Clockwise)

Preceding gene: 87200928

Following gene: 87200931

Centisome position: 88.03

GC content: 67.12

Gene sequence:

>888_bases
ATGACCGACCTTCAACGCGTGAGACTCGCGAGCGGCATCGAACTTGATGTGTTGGACGTCGGGCCAAGGGAAGCGCCCGT
CCTCATCTTCCTGCACGGCTTTCCCGAAAGCCACCGCACCTGGCGCCACCAGATCGCGCACCTCTCCACCCGCTTTCGCT
GCATCGCGCCCGACCAGCGCGGTTATCGCGGCTCGTCCAAACCGGAAGGCGTCGAGAACTACACGCCGGACAAGCTGATC
GGAGACGTGTTCCAGCTCGCCGATGCGCTTGGCGTCCAGCAGTTCACCATTCTCGGCCACGACTGGGGCGGTGCCATCGC
CTGGGGCGTCGCGCTGCTCGGCCAGGGGACGCGCGTCACCCGCGCGGTCATCGCCAATGCACCGCACCCGGTGATCTTCC
CCCGCCTGCTCTGGACCGACCGTCAACAGCGCGAGGCCAGCCAGTACATGCGCGCCTTCCGCGACACGGCCAACGACGCG
ATGGTGCGCGAACACGGCCTTGGCGCGCTACTGGCACAGGCGCTCAAGTGGGAACGCGCGCCGACCATGGAAGAGGAAGA
GCGCGCCGCCCTGTTCAAGGACTGGTCGAACCCCGACGCCGCAATCGCCATGCTCAACTGGTATCGCGCCAGCCCGATGG
CCGTGCCGCCGATGGACGCGCCGTTCGAACTGCCCGAAGGCTACCGGGACGCCGCCGTCCCGCCGCTCGCCATACCCACG
CTGGTGATCTGGGCGATGGACGACATGGCGCTGCCGCCCTGCAACCTCGACGGCATGGACAGGCTGGTCACCAACCTCAC
GGTGGAACCTGTGCACGATTGCGGGCATTTCGTGCCTTGGGAAGCGCCAGACGTCGTCAACGCCGCGCTTGACCGGTTCC
TCGGCTAG

Upstream 100 bases:

>100_bases
AAATCGGCGAATTGCGCCGCACGCCCGACGCCCTGCACGATCGCATGGCGGCAGTCGTCGCGGCGGGCTATGCCCAGAAG
ATGGATGAGGGAGCCAGCGA

Downstream 100 bases:

>100_bases
TCCTTCCCGAACCACTCCACCCACGCCCCATGTGCGTGGGCCGTGCCGAGGACCGCAGGCTCCCCGCCGCCCGGCCAATG
CCGCACGGTCAGTTCGTGGC

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTDLQRVRLASGIELDVLDVGPREAPVLIFLHGFPESHRTWRHQIAHLSTRFRCIAPDQRGYRGSSKPEGVENYTPDKLI
GDVFQLADALGVQQFTILGHDWGGAIAWGVALLGQGTRVTRAVIANAPHPVIFPRLLWTDRQQREASQYMRAFRDTANDA
MVREHGLGALLAQALKWERAPTMEEEERAALFKDWSNPDAAIAMLNWYRASPMAVPPMDAPFELPEGYRDAAVPPLAIPT
LVIWAMDDMALPPCNLDGMDRLVTNLTVEPVHDCGHFVPWEAPDVVNAALDRFLG

Sequences:

>Translated_295_residues
MTDLQRVRLASGIELDVLDVGPREAPVLIFLHGFPESHRTWRHQIAHLSTRFRCIAPDQRGYRGSSKPEGVENYTPDKLI
GDVFQLADALGVQQFTILGHDWGGAIAWGVALLGQGTRVTRAVIANAPHPVIFPRLLWTDRQQREASQYMRAFRDTANDA
MVREHGLGALLAQALKWERAPTMEEEERAALFKDWSNPDAAIAMLNWYRASPMAVPPMDAPFELPEGYRDAAVPPLAIPT
LVIWAMDDMALPPCNLDGMDRLVTNLTVEPVHDCGHFVPWEAPDVVNAALDRFLG
>Mature_294_residues
TDLQRVRLASGIELDVLDVGPREAPVLIFLHGFPESHRTWRHQIAHLSTRFRCIAPDQRGYRGSSKPEGVENYTPDKLIG
DVFQLADALGVQQFTILGHDWGGAIAWGVALLGQGTRVTRAVIANAPHPVIFPRLLWTDRQQREASQYMRAFRDTANDAM
VREHGLGALLAQALKWERAPTMEEEERAALFKDWSNPDAAIAMLNWYRASPMAVPPMDAPFELPEGYRDAAVPPLAIPTL
VIWAMDDMALPPCNLDGMDRLVTNLTVEPVHDCGHFVPWEAPDVVNAALDRFLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=300, Percent_Identity=26.3333333333333, Blast_Score=114, Evalue=9e-26,
Organism=Homo sapiens, GI218777840, Length=296, Percent_Identity=26.3513513513513, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI13376164, Length=296, Percent_Identity=26.3513513513513, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI27597073, Length=311, Percent_Identity=25.08038585209, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17554012, Length=303, Percent_Identity=27.0627062706271, Blast_Score=128, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17562298, Length=290, Percent_Identity=26.551724137931, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32886; Mature: 32755

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLQRVRLASGIELDVLDVGPREAPVLIFLHGFPESHRTWRHQIAHLSTRFRCIAPDQR
CCCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEECCCCC
GYRGSSKPEGVENYTPDKLIGDVFQLADALGVQQFTILGHDWGGAIAWGVALLGQGTRVT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCHHH
RAVIANAPHPVIFPRLLWTDRQQREASQYMRAFRDTANDAMVREHGLGALLAQALKWERA
HHHHHCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
PTMEEEERAALFKDWSNPDAAIAMLNWYRASPMAVPPMDAPFELPEGYRDAAVPPLAIPT
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LVIWAMDDMALPPCNLDGMDRLVTNLTVEPVHDCGHFVPWEAPDVVNAALDRFLG
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TDLQRVRLASGIELDVLDVGPREAPVLIFLHGFPESHRTWRHQIAHLSTRFRCIAPDQR
CCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEECCCCC
GYRGSSKPEGVENYTPDKLIGDVFQLADALGVQQFTILGHDWGGAIAWGVALLGQGTRVT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCHHH
RAVIANAPHPVIFPRLLWTDRQQREASQYMRAFRDTANDAMVREHGLGALLAQALKWERA
HHHHHCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
PTMEEEERAALFKDWSNPDAAIAMLNWYRASPMAVPPMDAPFELPEGYRDAAVPPLAIPT
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LVIWAMDDMALPPCNLDGMDRLVTNLTVEPVHDCGHFVPWEAPDVVNAALDRFLG
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]