Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200854
Identifier: 87200854
GI number: 87200854
Start: 3066140
End: 3066832
Strand: Direct
Name: 87200854
Synonym: Saro_2841
Alternate gene names: NA
Gene position: 3066140-3066832 (Clockwise)
Preceding gene: 87200853
Following gene: 87200859
Centisome position: 86.09
GC content: 67.82
Gene sequence:
>693_bases ATGAAGCGTTTCTACAAGCAGGTGACGGTCGAGGCAGCGGAAGGCGGCTTCGCGGTGAAACTCGACGGGCGGGCGATCCG CACCGTCGGCAAGCGGACGCAGGTCGTGCCCACCCATGCGCTGGCCGAAGCGATGGCGGCGGAGTGGGCCGGACAGGGCG AGGAGATCGACCCGCAGGCGTTCCTTTTCCGCGACATGGCCGACTATGCGATCGACGTGGTCGCGCAAGACCCGGCCAGC GTCATCGGCGAATTGCTGCCTTATGCCGAAACCGACACCCTGTGTTACCGCGCGGAGCCCGACGAGGCCTTCGCCGCCCG CCAGCGGCTGATGTGGGAGCCGCTTCTGGCTGACGCGGAAACGCGGCTGGGCGTGCGCTTCGTGCGCGTATCGGGCATCA TGCACAAGCCGCAGCCGCCCGAGACTCTGGCCCGGCTCAAGGTCGAACTGGAAGGGCTGGGCGCGTTCCAGCTTGCGGCG CTGCGCAATACGGCAAGCCTCGCCGCATCGCTTGTGCTGGGCCTTGCCACCCTGCGCCCTGATGCCGACATCGACGCGCT GTGGGATGCGGCCAATCTCGAGGAAGACTGGCAGGCCGAGCTTTGGGGCAAGGACGCCGAAGCGATGGAGCGCCGCGAAA AGCGCGCCGCAGCCTTTGCTGCGGCAGCGCGGTTTGCGGCGCTGGCAAGATAG
Upstream 100 bases:
>100_bases TTGCCTCCGGTGGCCGGCATCGTCATGGCGGCGGCGGGCCTGTTGGACTTCTTTTTCCTGCCGCGCGCACTGGCCCGGCG GTGGCGGACTCCGGATTGAG
Downstream 100 bases:
>100_bases AGACCCGCCCCGTCAGGCCACCCAGTCGGCGACCTGGCTGGCGACCGCATTGGCCGCTTCGTTGAGCGCGGGACCGACGT ATTTCGCCTCGGCATCGGTG
Product: ATP12 ATPase
Products: NA
Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAFLFRDMADYAIDVVAQDPAS VIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAA LRNTASLAASLVLGLATLRPDADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR
Sequences:
>Translated_230_residues MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAFLFRDMADYAIDVVAQDPAS VIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAA LRNTASLAASLVLGLATLRPDADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR >Mature_230_residues MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAFLFRDMADYAIDVVAQDPAS VIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAA LRNTASLAASLVLGLATLRPDADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR
Specific function: Unknown
COG id: COG5387
COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21735485, Length=223, Percent_Identity=30.4932735426009, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71995783, Length=223, Percent_Identity=27.3542600896861, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585626, Length=233, Percent_Identity=24.8927038626609, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25212; Mature: 25212
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQA CCHHHHHHHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH FLFRDMADYAIDVVAQDPASVIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAE HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCH TRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAALRNTASLAASLVLGLATLRP HHHCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR CCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQA CCHHHHHHHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH FLFRDMADYAIDVVAQDPASVIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAE HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCH TRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAALRNTASLAASLVLGLATLRP HHHCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR CCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA