Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200854

Identifier: 87200854

GI number: 87200854

Start: 3066140

End: 3066832

Strand: Direct

Name: 87200854

Synonym: Saro_2841

Alternate gene names: NA

Gene position: 3066140-3066832 (Clockwise)

Preceding gene: 87200853

Following gene: 87200859

Centisome position: 86.09

GC content: 67.82

Gene sequence:

>693_bases
ATGAAGCGTTTCTACAAGCAGGTGACGGTCGAGGCAGCGGAAGGCGGCTTCGCGGTGAAACTCGACGGGCGGGCGATCCG
CACCGTCGGCAAGCGGACGCAGGTCGTGCCCACCCATGCGCTGGCCGAAGCGATGGCGGCGGAGTGGGCCGGACAGGGCG
AGGAGATCGACCCGCAGGCGTTCCTTTTCCGCGACATGGCCGACTATGCGATCGACGTGGTCGCGCAAGACCCGGCCAGC
GTCATCGGCGAATTGCTGCCTTATGCCGAAACCGACACCCTGTGTTACCGCGCGGAGCCCGACGAGGCCTTCGCCGCCCG
CCAGCGGCTGATGTGGGAGCCGCTTCTGGCTGACGCGGAAACGCGGCTGGGCGTGCGCTTCGTGCGCGTATCGGGCATCA
TGCACAAGCCGCAGCCGCCCGAGACTCTGGCCCGGCTCAAGGTCGAACTGGAAGGGCTGGGCGCGTTCCAGCTTGCGGCG
CTGCGCAATACGGCAAGCCTCGCCGCATCGCTTGTGCTGGGCCTTGCCACCCTGCGCCCTGATGCCGACATCGACGCGCT
GTGGGATGCGGCCAATCTCGAGGAAGACTGGCAGGCCGAGCTTTGGGGCAAGGACGCCGAAGCGATGGAGCGCCGCGAAA
AGCGCGCCGCAGCCTTTGCTGCGGCAGCGCGGTTTGCGGCGCTGGCAAGATAG

Upstream 100 bases:

>100_bases
TTGCCTCCGGTGGCCGGCATCGTCATGGCGGCGGCGGGCCTGTTGGACTTCTTTTTCCTGCCGCGCGCACTGGCCCGGCG
GTGGCGGACTCCGGATTGAG

Downstream 100 bases:

>100_bases
AGACCCGCCCCGTCAGGCCACCCAGTCGGCGACCTGGCTGGCGACCGCATTGGCCGCTTCGTTGAGCGCGGGACCGACGT
ATTTCGCCTCGGCATCGGTG

Product: ATP12 ATPase

Products: NA

Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAFLFRDMADYAIDVVAQDPAS
VIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAA
LRNTASLAASLVLGLATLRPDADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR

Sequences:

>Translated_230_residues
MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAFLFRDMADYAIDVVAQDPAS
VIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAA
LRNTASLAASLVLGLATLRPDADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR
>Mature_230_residues
MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAFLFRDMADYAIDVVAQDPAS
VIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAETRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAA
LRNTASLAASLVLGLATLRPDADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR

Specific function: Unknown

COG id: COG5387

COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21735485, Length=223, Percent_Identity=30.4932735426009, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71995783, Length=223, Percent_Identity=27.3542600896861, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585626, Length=233, Percent_Identity=24.8927038626609, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25212; Mature: 25212

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQA
CCHHHHHHHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
FLFRDMADYAIDVVAQDPASVIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAE
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCH
TRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAALRNTASLAASLVLGLATLRP
HHHCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR
CCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQA
CCHHHHHHHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
FLFRDMADYAIDVVAQDPASVIGELLPYAETDTLCYRAEPDEAFAARQRLMWEPLLADAE
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCH
TRLGVRFVRVSGIMHKPQPPETLARLKVELEGLGAFQLAALRNTASLAASLVLGLATLRP
HHHCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DADIDALWDAANLEEDWQAELWGKDAEAMERREKRAAAFAAAARFAALAR
CCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA