Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200445

Identifier: 87200445

GI number: 87200445

Start: 2615344

End: 2616177

Strand: Reverse

Name: 87200445

Synonym: Saro_2432

Alternate gene names: NA

Gene position: 2616177-2615344 (Counterclockwise)

Preceding gene: 87200446

Following gene: 87200444

Centisome position: 73.46

GC content: 68.11

Gene sequence:

>834_bases
ATGATCGTCGACAGCCACCATCATTTCTGGAGCCTCGGCAATCCTTTCACCGACTGGCCGACGCCGGACCTCGCGCCGAT
CCACCGCGATTTCCTGCCCTCGGACCTCGAGGCGGAAATCGCAGCCGCCGGGGTGACCGGAACCGTTCTCGTCCAGGCGG
CGCCCGCCCTTGCGGAGACGCACTGGCTTCTGGAGATCGCGGCGCGGACGCCAACGGTTCTGGGCGTCGTCGGCTGGGTC
GATCTTGCCGCCCCTTCCGCCACCGAGGATTTGACAGCGCTGGCCCACGACCCGCTCCTGCGCGGCCTGCGCCCGATGCT
TCAGTCGATCCCGCAACAGGGCTGGATTCTCGCAGGCGCGGTCGAGCCGGCCCTTCGCGCCATGGCAGGGCGGGGGCTCT
GCTTCGATGCCCTCGTTCGTGCCGACCAGATCGGCGAGATCACCCGCCTGGCGCGTCGCCATCCAGACTTGCGCATCGTG
CTCGACCACGGCGGAAAGCCTGACATCGCCAATGGCGTCTTCGCGCCCTGGGCAGCCGATCTCGAAGTGCTCGCCGCCTG
TCCCAACGTCTGGTGCAAGCTGTCGGGCTTGTGGACCGAGGCTGGGCAGGATCTCTCCGACGCGACAATCGCGCCCTGGG
CGCGGCACATCCTGTCGTGCTTCGGCACTGCCCGCACGATCTGGGGCAGCGACTGGCCGGTCGTGCGACTGGCCGGGGGA
TACACCGGCTGGCTGGCCCAGTGCCGCCGCCTGCTCGACGACCTCGACGACCATGGTCGCGCGCAGGTCTTTGCCCTCAA
CGGAATGGATTTCTATGGCCTTGCCCGAAGCTGA

Upstream 100 bases:

>100_bases
CGGTCGATCTGGCCGGTCGCACGATCCCCACGGCCTTCTGGGCGGATCTGGTGGATGCCGGGCTCGTCGATCCCGCCGCT
CCGCTTCCGGGAGGGAGCGC

Downstream 100 bases:

>100_bases
CAGAGAGCAGGGCGCGTTCCTGCTGCTCGATCCGGCGGACAACATCCTGGTCTGCACGCGCGATGCGCTGGCGGGCGACC
TGGTGACCATCGACGGCATT

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIVDSHHHFWSLGNPFTDWPTPDLAPIHRDFLPSDLEAEIAAAGVTGTVLVQAAPALAETHWLLEIAARTPTVLGVVGWV
DLAAPSATEDLTALAHDPLLRGLRPMLQSIPQQGWILAGAVEPALRAMAGRGLCFDALVRADQIGEITRLARRHPDLRIV
LDHGGKPDIANGVFAPWAADLEVLAACPNVWCKLSGLWTEAGQDLSDATIAPWARHILSCFGTARTIWGSDWPVVRLAGG
YTGWLAQCRRLLDDLDDHGRAQVFALNGMDFYGLARS

Sequences:

>Translated_277_residues
MIVDSHHHFWSLGNPFTDWPTPDLAPIHRDFLPSDLEAEIAAAGVTGTVLVQAAPALAETHWLLEIAARTPTVLGVVGWV
DLAAPSATEDLTALAHDPLLRGLRPMLQSIPQQGWILAGAVEPALRAMAGRGLCFDALVRADQIGEITRLARRHPDLRIV
LDHGGKPDIANGVFAPWAADLEVLAACPNVWCKLSGLWTEAGQDLSDATIAPWARHILSCFGTARTIWGSDWPVVRLAGG
YTGWLAQCRRLLDDLDDHGRAQVFALNGMDFYGLARS
>Mature_277_residues
MIVDSHHHFWSLGNPFTDWPTPDLAPIHRDFLPSDLEAEIAAAGVTGTVLVQAAPALAETHWLLEIAARTPTVLGVVGWV
DLAAPSATEDLTALAHDPLLRGLRPMLQSIPQQGWILAGAVEPALRAMAGRGLCFDALVRADQIGEITRLARRHPDLRIV
LDHGGKPDIANGVFAPWAADLEVLAACPNVWCKLSGLWTEAGQDLSDATIAPWARHILSCFGTARTIWGSDWPVVRLAGG
YTGWLAQCRRLLDDLDDHGRAQVFALNGMDFYGLARS

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 29990; Mature: 29990

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDSHHHFWSLGNPFTDWPTPDLAPIHRDFLPSDLEAEIAAAGVTGTVLVQAAPALAET
CEECCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCHHHHHHHCHHHHHH
HWLLEIAARTPTVLGVVGWVDLAAPSATEDLTALAHDPLLRGLRPMLQSIPQQGWILAGA
HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH
VEPALRAMAGRGLCFDALVRADQIGEITRLARRHPDLRIVLDHGGKPDIANGVFAPWAAD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHH
LEVLAACPNVWCKLSGLWTEAGQDLSDATIAPWARHILSCFGTARTIWGSDWPVVRLAGG
HHHHHHCCHHHEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
YTGWLAQCRRLLDDLDDHGRAQVFALNGMDFYGLARS
CHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MIVDSHHHFWSLGNPFTDWPTPDLAPIHRDFLPSDLEAEIAAAGVTGTVLVQAAPALAET
CEECCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCHHHHHHHCHHHHHH
HWLLEIAARTPTVLGVVGWVDLAAPSATEDLTALAHDPLLRGLRPMLQSIPQQGWILAGA
HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH
VEPALRAMAGRGLCFDALVRADQIGEITRLARRHPDLRIVLDHGGKPDIANGVFAPWAAD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHH
LEVLAACPNVWCKLSGLWTEAGQDLSDATIAPWARHILSCFGTARTIWGSDWPVVRLAGG
HHHHHHCCHHHEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
YTGWLAQCRRLLDDLDDHGRAQVFALNGMDFYGLARS
CHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]