Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200424

Identifier: 87200424

GI number: 87200424

Start: 2581270

End: 2583744

Strand: Reverse

Name: 87200424

Synonym: Saro_2411

Alternate gene names: NA

Gene position: 2583744-2581270 (Counterclockwise)

Preceding gene: 87200425

Following gene: 87200422

Centisome position: 72.54

GC content: 70.02

Gene sequence:

>2475_bases
ATGACGCCGACCGGCCTGCATCGCCGCGAGGTCCTGTCGCTGCTGGGCACGACAGCCTGTACCATCGCCGCCTCTGCCCA
CGCTTCGGCACCCGCTGGCGCGCTTTCCCCGTCGCCTGCTGATCCGCACCATCGCCTCGTCTTCGACAGCCCCGCGCGCG
AATGGATCGAGGCGCTCCCCGTCGGCAACGGCCGCCTCGGCGCAATGATGCACGGCCTGCTCGATGGCGAGCGACTCTCG
CTCAACGAGGACACGCTCTGGTCGGGCCAGCCCTCGGTCGGCGGGGCCGCCGCCGACGGCCTCCTCGAACAGATGCGCGA
TCTGATCTTCGCTGGCGACTATCCGGGGGCAGACCGCCTCGCGCGCCGGATGCAGGGCCACTTCAGCGAGGCTTACCTGC
CGCTGGCCGACCTCCACGTCGATCTCGATCAAGCCGGTCCCGCCCGCGCGATCCGCCGCACGCTCGACCTTCGCGAAGCC
ACTGCCGGGGTCGAGATCGACCGCGATGGCGGCATTGAACGGCGCACGCTCTTTGTCTCGGCCCCGGCGCAACTCGTGGT
GTTCAGGATCGAGCGTGAGGGCGCCGCCCGCTTCGGCGCCAGCGTGCGCCTCGACTGCCAGCTTCGCTCTTCCATCCGCG
CCGTATCGCCCCGCCGCCTCGTCCTCGCCGGCAAGGCGCCCACGGTGTGCGAGCCCGACTATCGCAACGTCCCGGACCCC
GTTCGCTATTCCGACCGCGCCGGCTACGGCATGGCCTTCGCCGCGATTGCCGAGATCGACACCGACGGCTCAGTCCGAAA
GGGGGAGGGCGCTCTTCGGGTCGAGAACGCCGGCTGGCTCGAGATTCGCCTTGCCGCCGCCACCGGCTATCGTGGCCCCC
ACGTCCTGCCCGACCTCGATCCCGGCGCGGTGGAGGCGCTGGCAGCCGCGCCCTTGCGCCGCGCAAGGGGCAAGCCGCAC
ACCCGCCTTCTGGCCGACCACCGCCGCGATCACCGCGCGCTGTATGAACGGTCCGCGCTCGCGCTCGGCGGCGGCGACAC
CGCCCGGCGGCACGATGGCCTGCCCACCGATGCGCGCCGCGCCGCCGATCCGGGCGACCCCGCGCTCGCGGCGCTGCTCT
ACAATTACGGCCGCTATCTGCTGATCGCGAGTTCCCGGCCCGGAACGCGTCCGGCGAACCTCCAGGGCATCTGGAACGCG
CAATTGCGCGCGCCGTGGAGCTGCAACTACACCACCAACATCAACGTGCCGATGAACTACTGGATGGCCGAGACCGCCAA
CCTCGCCGATTGCCATCGTCCGCTGGTCGATTTCGCCGAAGCGCTGGCGCGGAATGGCGGCGACACCGCGCGCGATTACT
ACCGGATGCCCGGCTGGTGCCTGCACCACAACACCGACCTGTGGGCCATGTCTAATCCGGTCGGCGCGGGCGAGGGCGAT
CCCAACTGGGCCAACTGGCCGATGGGTGCGCCATGGATCGCGCAGCACTTGTGGGAACACTACCGCTTCTCGGGCGACCT
GGCGTTCCTGCGCGACCGCGCCTGGCCGGTAATGCGCGGCGCGGCGGATTTCTGCGTCGGCTGGCTGGTACGCGATCCCG
CCTCGGGCCAACTCACTACCGCCCCCTCGATCTCGCCCGAAAACCTCTTTGTGACGGCCGATGGCCGGACGGCCGCAATC
AGCGCGGGGTGCACGATGGACATCGCCATGATCCGCGAGCTGTTCGGCAACTGCATCGCCGCCGCCGCCGTCCTGGGCGA
GGATGCCGCCTTCGCGAAAGTCTTGCGCAACCTGTCCGAAGAGCTTCCTCCCTACCGCATCGGCCGCCACGGCCAGTTGC
AGGAATGGTCGGTCGATTTCGCGGAACAGGACCCGGGACACCGGACAGTCTCGCACCTCTATCCGATCTTTCCAGGCGGC
GATATCACGCCCCGCCGCTCGCCTCGACTGGCAGCGGCAGCCGCGCGCTCGCTCGACCGGCGCGAGGCGCATGGTGGCAG
CTCAACCGGATGGTCGCGCGCCTGGGCCACGGCAATCCGCGCGCGTCTTGGCGATGGCAAGGCTTGCGGAGAGGCGCTCG
AACGTTTCCTCGCCGATCACGTCGCGCGCAGCCTGTTAGGCACTCACCCATTCCATCCGCATCCGGTCTTCCAGATCGAC
GCGAACCTCGGCATCGCTGCGGCGATCGCCGAATGTCTCGTGCAGAGCCACGAGGACCGGATCGAGCTGTTTCCCGCCCT
GCCGCCGCGCTGGCGGGAAGGGGCAGTGAAGGGCCTGCGCACGCGGCACGGGGCAACGGTCGATCTCGAATGGACGCCCG
CAGGCGCGACCGTTCTCCTTCATGCGCGGCGCGGCGGCACGGTCACGGTCGGCCTCCCGCCCTCGCTCCGTCCCTCTTCC
GGCGCCGCCGTGGCGCAGGTCGATCTGCGCGTCGGCAGGGATCGCACAGCCAGGCTTGCCCTGATCGCCGTCTGA

Upstream 100 bases:

>100_bases
CGGCAATGGCCCCGGTCCCCGGCCTGCGCTGCGTCGCCCGCATCGACGCGCGGACCTGGCACCTCATCGGCCAGGACCTC
GCGGTCTGAGCCGCGCGGCG

Downstream 100 bases:

>100_bases
CCCACCGTTCGCGTCTACCCCCGACCATTCACCCCCCTGATCGCCAACCTTGCCCCGGCTTCTCACCGGAGGCGTTCACG
CGCGCACGTACCGCGGTCAC

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Trehalose And Maltose Hydrolase-Like Protein; Fibronectin Type III Domain-Containing Protein; 1 2-A-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 824; Mature: 823

Protein sequence:

>824_residues
MTPTGLHRREVLSLLGTTACTIAASAHASAPAGALSPSPADPHHRLVFDSPAREWIEALPVGNGRLGAMMHGLLDGERLS
LNEDTLWSGQPSVGGAAADGLLEQMRDLIFAGDYPGADRLARRMQGHFSEAYLPLADLHVDLDQAGPARAIRRTLDLREA
TAGVEIDRDGGIERRTLFVSAPAQLVVFRIEREGAARFGASVRLDCQLRSSIRAVSPRRLVLAGKAPTVCEPDYRNVPDP
VRYSDRAGYGMAFAAIAEIDTDGSVRKGEGALRVENAGWLEIRLAAATGYRGPHVLPDLDPGAVEALAAAPLRRARGKPH
TRLLADHRRDHRALYERSALALGGGDTARRHDGLPTDARRAADPGDPALAALLYNYGRYLLIASSRPGTRPANLQGIWNA
QLRAPWSCNYTTNINVPMNYWMAETANLADCHRPLVDFAEALARNGGDTARDYYRMPGWCLHHNTDLWAMSNPVGAGEGD
PNWANWPMGAPWIAQHLWEHYRFSGDLAFLRDRAWPVMRGAADFCVGWLVRDPASGQLTTAPSISPENLFVTADGRTAAI
SAGCTMDIAMIRELFGNCIAAAAVLGEDAAFAKVLRNLSEELPPYRIGRHGQLQEWSVDFAEQDPGHRTVSHLYPIFPGG
DITPRRSPRLAAAAARSLDRREAHGGSSTGWSRAWATAIRARLGDGKACGEALERFLADHVARSLLGTHPFHPHPVFQID
ANLGIAAAIAECLVQSHEDRIELFPALPPRWREGAVKGLRTRHGATVDLEWTPAGATVLLHARRGGTVTVGLPPSLRPSS
GAAVAQVDLRVGRDRTARLALIAV

Sequences:

>Translated_824_residues
MTPTGLHRREVLSLLGTTACTIAASAHASAPAGALSPSPADPHHRLVFDSPAREWIEALPVGNGRLGAMMHGLLDGERLS
LNEDTLWSGQPSVGGAAADGLLEQMRDLIFAGDYPGADRLARRMQGHFSEAYLPLADLHVDLDQAGPARAIRRTLDLREA
TAGVEIDRDGGIERRTLFVSAPAQLVVFRIEREGAARFGASVRLDCQLRSSIRAVSPRRLVLAGKAPTVCEPDYRNVPDP
VRYSDRAGYGMAFAAIAEIDTDGSVRKGEGALRVENAGWLEIRLAAATGYRGPHVLPDLDPGAVEALAAAPLRRARGKPH
TRLLADHRRDHRALYERSALALGGGDTARRHDGLPTDARRAADPGDPALAALLYNYGRYLLIASSRPGTRPANLQGIWNA
QLRAPWSCNYTTNINVPMNYWMAETANLADCHRPLVDFAEALARNGGDTARDYYRMPGWCLHHNTDLWAMSNPVGAGEGD
PNWANWPMGAPWIAQHLWEHYRFSGDLAFLRDRAWPVMRGAADFCVGWLVRDPASGQLTTAPSISPENLFVTADGRTAAI
SAGCTMDIAMIRELFGNCIAAAAVLGEDAAFAKVLRNLSEELPPYRIGRHGQLQEWSVDFAEQDPGHRTVSHLYPIFPGG
DITPRRSPRLAAAAARSLDRREAHGGSSTGWSRAWATAIRARLGDGKACGEALERFLADHVARSLLGTHPFHPHPVFQID
ANLGIAAAIAECLVQSHEDRIELFPALPPRWREGAVKGLRTRHGATVDLEWTPAGATVLLHARRGGTVTVGLPPSLRPSS
GAAVAQVDLRVGRDRTARLALIAV
>Mature_823_residues
TPTGLHRREVLSLLGTTACTIAASAHASAPAGALSPSPADPHHRLVFDSPAREWIEALPVGNGRLGAMMHGLLDGERLSL
NEDTLWSGQPSVGGAAADGLLEQMRDLIFAGDYPGADRLARRMQGHFSEAYLPLADLHVDLDQAGPARAIRRTLDLREAT
AGVEIDRDGGIERRTLFVSAPAQLVVFRIEREGAARFGASVRLDCQLRSSIRAVSPRRLVLAGKAPTVCEPDYRNVPDPV
RYSDRAGYGMAFAAIAEIDTDGSVRKGEGALRVENAGWLEIRLAAATGYRGPHVLPDLDPGAVEALAAAPLRRARGKPHT
RLLADHRRDHRALYERSALALGGGDTARRHDGLPTDARRAADPGDPALAALLYNYGRYLLIASSRPGTRPANLQGIWNAQ
LRAPWSCNYTTNINVPMNYWMAETANLADCHRPLVDFAEALARNGGDTARDYYRMPGWCLHHNTDLWAMSNPVGAGEGDP
NWANWPMGAPWIAQHLWEHYRFSGDLAFLRDRAWPVMRGAADFCVGWLVRDPASGQLTTAPSISPENLFVTADGRTAAIS
AGCTMDIAMIRELFGNCIAAAAVLGEDAAFAKVLRNLSEELPPYRIGRHGQLQEWSVDFAEQDPGHRTVSHLYPIFPGGD
ITPRRSPRLAAAAARSLDRREAHGGSSTGWSRAWATAIRARLGDGKACGEALERFLADHVARSLLGTHPFHPHPVFQIDA
NLGIAAAIAECLVQSHEDRIELFPALPPRWREGAVKGLRTRHGATVDLEWTPAGATVLLHARRGGTVTVGLPPSLRPSSG
AAVAQVDLRVGRDRTARLALIAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89142; Mature: 89011

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTGLHRREVLSLLGTTACTIAASAHASAPAGALSPSPADPHHRLVFDSPAREWIEALP
CCCCCCHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCC
VGNGRLGAMMHGLLDGERLSLNEDTLWSGQPSVGGAAADGLLEQMRDLIFAGDYPGADRL
CCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCHHHH
ARRMQGHFSEAYLPLADLHVDLDQAGPARAIRRTLDLREATAGVEIDRDGGIERRTLFVS
HHHHHCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEE
APAQLVVFRIEREGAARFGASVRLDCQLRSSIRAVSPRRLVLAGKAPTVCEPDYRNVPDP
CCCEEEEEEEECCCHHHCCCCEEEEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
VRYSDRAGYGMAFAAIAEIDTDGSVRKGEGALRVENAGWLEIRLAAATGYRGPHVLPDLD
CCCCCCCCCCEEEEEEEEECCCCCEECCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCC
PGAVEALAAAPLRRARGKPHTRLLADHRRDHRALYERSALALGGGDTARRHDGLPTDARR
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCHHHH
AADPGDPALAALLYNYGRYLLIASSRPGTRPANLQGIWNAQLRAPWSCNYTTNINVPMNY
CCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCHHH
WMAETANLADCHRPLVDFAEALARNGGDTARDYYRMPGWCLHHNTDLWAMSNPVGAGEGD
HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCEEEECCCCCCCCCC
PNWANWPMGAPWIAQHLWEHYRFSGDLAFLRDRAWPVMRGAADFCVGWLVRDPASGQLTT
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCHHHHHHHHEECCCCCCEEE
APSISPENLFVTADGRTAAISAGCTMDIAMIRELFGNCIAAAAVLGEDAAFAKVLRNLSE
CCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ELPPYRIGRHGQLQEWSVDFAEQDPGHRTVSHLYPIFPGGDITPRRSPRLAAAAARSLDR
HCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
REAHGGSSTGWSRAWATAIRARLGDGKACGEALERFLADHVARSLLGTHPFHPHPVFQID
HHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
ANLGIAAAIAECLVQSHEDRIELFPALPPRWREGAVKGLRTRHGATVDLEWTPAGATVLL
CCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEE
HARRGGTVTVGLPPSLRPSSGAAVAQVDLRVGRDRTARLALIAV
EECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
TPTGLHRREVLSLLGTTACTIAASAHASAPAGALSPSPADPHHRLVFDSPAREWIEALP
CCCCCHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCC
VGNGRLGAMMHGLLDGERLSLNEDTLWSGQPSVGGAAADGLLEQMRDLIFAGDYPGADRL
CCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCHHHH
ARRMQGHFSEAYLPLADLHVDLDQAGPARAIRRTLDLREATAGVEIDRDGGIERRTLFVS
HHHHHCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEE
APAQLVVFRIEREGAARFGASVRLDCQLRSSIRAVSPRRLVLAGKAPTVCEPDYRNVPDP
CCCEEEEEEEECCCHHHCCCCEEEEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
VRYSDRAGYGMAFAAIAEIDTDGSVRKGEGALRVENAGWLEIRLAAATGYRGPHVLPDLD
CCCCCCCCCCEEEEEEEEECCCCCEECCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCC
PGAVEALAAAPLRRARGKPHTRLLADHRRDHRALYERSALALGGGDTARRHDGLPTDARR
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCHHHH
AADPGDPALAALLYNYGRYLLIASSRPGTRPANLQGIWNAQLRAPWSCNYTTNINVPMNY
CCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCHHH
WMAETANLADCHRPLVDFAEALARNGGDTARDYYRMPGWCLHHNTDLWAMSNPVGAGEGD
HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCEEEECCCCCCCCCC
PNWANWPMGAPWIAQHLWEHYRFSGDLAFLRDRAWPVMRGAADFCVGWLVRDPASGQLTT
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCHHHHHHHHEECCCCCCEEE
APSISPENLFVTADGRTAAISAGCTMDIAMIRELFGNCIAAAAVLGEDAAFAKVLRNLSE
CCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ELPPYRIGRHGQLQEWSVDFAEQDPGHRTVSHLYPIFPGGDITPRRSPRLAAAAARSLDR
HCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
REAHGGSSTGWSRAWATAIRARLGDGKACGEALERFLADHVARSLLGTHPFHPHPVFQID
HHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
ANLGIAAAIAECLVQSHEDRIELFPALPPRWREGAVKGLRTRHGATVDLEWTPAGATVLL
CCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEE
HARRGGTVTVGLPPSLRPSSGAAVAQVDLRVGRDRTARLALIAV
EECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA