Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200390
Identifier: 87200390
GI number: 87200390
Start: 2527939
End: 2529354
Strand: Reverse
Name: 87200390
Synonym: Saro_2377
Alternate gene names: NA
Gene position: 2529354-2527939 (Counterclockwise)
Preceding gene: 87200391
Following gene: 87200389
Centisome position: 71.02
GC content: 66.53
Gene sequence:
>1416_bases ATGCTGGACAAATTCATCGCAATCCGGCGGTTCGCGGGCATCGGTAGCGCCTTTCCGCGCTCGGCCGTGATGGCCTTTGC TGCGTGCCTGGCGATGGCCGGCGCGGCTCTTGGCGCGTCCTCGCTTGTTTCACCGGCGGTCCAGGCTCAGGGGGCGGGCG GCTCGCTTCGGGCCCACGTCGGCGTTGCGTCCTGCGCGGGCTCGACGTGTCACGGCCGCAGCGCGGCTGATGGGGCTGTG GTCCGACAGGATGAACTCATGCGCTGGCAGGAGGAGTCCTCTCCTTCGGGCGCGCATAGCCGCGCCTGGCGGGTGATCCA GGAGCCGCGCGGACAAGCGATCATCCGCCGCATGGGTCTCGATTCCGCCGGCATCCAGCGGGAATGTGCGGGTTGCCACG TTACGCCCGGTTCCGCTCGGCCTGCCGATGGCGTCGATTGCGAGGCCTGCCATGGCGCGTCCGGTGGCTGGCTTTCCACG CACTACACCGTGGGCGCAAGCCACGCGCGCAACGTGGCGCAGGGTATGACCGACCTTACCAGTCCGCGCACAAAGGCCCA GGTTTGCCTCGATTGCCACTTCTCGGGCGATGCCAAGGGGCAGTTCATCGCCCACCGCATCATGGCCGCCGGTCATCCGC GCATCTCGTTCGAGCTTGATCTCTGCACGACCCTCCAGCAGCATCACGACGAAGACGCCGACTACGTGCGCCGCAAGGGC GGCAAGACGAACTCGATGCGCATGTGGGCCGTCGGGCAGGCCGAAGCGGTGAAGCGCAGCCTCGAACTGTTCAGCCAACC GGCTCGGGCGACCGACGGCATTTTCCCCGAGTTCACGTTCTACGACTGCCATTCCTGCCATCGCCGGATTTACGATGGCG AAGAGGGCAACGTCACTGCGGTGCCCAACCCCGGGCGCCCGGTCCATCTCGGCATGCCGCCTTACAATGACGAGAACATC ATCATGCTTCTTGCCGCGGCCAGGGTCGTTGCGCCCGATGCTGCCGCAGGCTTCGACGCAAGGAGCAAGGCATTCCACCG GGCCATGGGTGCCAATCGCGCCGAAGCCGTGGCAGCCGCTCAGGCGCTGCGGCAGTCCGCGGACGCTTTGTCGTCGCGCT TCGCCTCGGCCAGTTTTACCCGCGAGCAGACTTTCGCGATCATGGAATCGATCGCCAGCGATGCCATTGGCGAACGCTTC ACCGACTACGGCGGGGCAGTGCAGTCGGTCATGGCGGTCGACACGCTGCTGAACGGCCTCGTCAATCAGGGCATGGTGCC GGCGGGCTCGGCGGGTAACCTGAGGGTGCAGATCAACCAGGCCTATGCCGCTGTACGCGACCCCAATGGTTTCCAGCCGT TTGCCTTCCGTCGCGCGCTCGGTGGTGCCGTCCGATCGATCCGGAGCCTCCGCTGA
Upstream 100 bases:
>100_bases CCTAGGCTCCATCCAACGGGGTCGCATTGCAGCACTTCCGGCAAGCGCGTGGTACAGGGCAACAGCCCGGCTGCGTGGGG TCCGGCGGGGACGAGGGGCA
Downstream 100 bases:
>100_bases TGCGCATGCCATTGCCCCTGAGGCAGGGAACCGCCGTCGCACTTGCTCTCTCGCTTGCGCTTTCCGGGTGCGGCGGGGGT GACTCCTCGTCGGGTGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MLDKFIAIRRFAGIGSAFPRSAVMAFAACLAMAGAALGASSLVSPAVQAQGAGGSLRAHVGVASCAGSTCHGRSAADGAV VRQDELMRWQEESSPSGAHSRAWRVIQEPRGQAIIRRMGLDSAGIQRECAGCHVTPGSARPADGVDCEACHGASGGWLST HYTVGASHARNVAQGMTDLTSPRTKAQVCLDCHFSGDAKGQFIAHRIMAAGHPRISFELDLCTTLQQHHDEDADYVRRKG GKTNSMRMWAVGQAEAVKRSLELFSQPARATDGIFPEFTFYDCHSCHRRIYDGEEGNVTAVPNPGRPVHLGMPPYNDENI IMLLAAARVVAPDAAAGFDARSKAFHRAMGANRAEAVAAAQALRQSADALSSRFASASFTREQTFAIMESIASDAIGERF TDYGGAVQSVMAVDTLLNGLVNQGMVPAGSAGNLRVQINQAYAAVRDPNGFQPFAFRRALGGAVRSIRSLR
Sequences:
>Translated_471_residues MLDKFIAIRRFAGIGSAFPRSAVMAFAACLAMAGAALGASSLVSPAVQAQGAGGSLRAHVGVASCAGSTCHGRSAADGAV VRQDELMRWQEESSPSGAHSRAWRVIQEPRGQAIIRRMGLDSAGIQRECAGCHVTPGSARPADGVDCEACHGASGGWLST HYTVGASHARNVAQGMTDLTSPRTKAQVCLDCHFSGDAKGQFIAHRIMAAGHPRISFELDLCTTLQQHHDEDADYVRRKG GKTNSMRMWAVGQAEAVKRSLELFSQPARATDGIFPEFTFYDCHSCHRRIYDGEEGNVTAVPNPGRPVHLGMPPYNDENI IMLLAAARVVAPDAAAGFDARSKAFHRAMGANRAEAVAAAQALRQSADALSSRFASASFTREQTFAIMESIASDAIGERF TDYGGAVQSVMAVDTLLNGLVNQGMVPAGSAGNLRVQINQAYAAVRDPNGFQPFAFRRALGGAVRSIRSLR >Mature_471_residues MLDKFIAIRRFAGIGSAFPRSAVMAFAACLAMAGAALGASSLVSPAVQAQGAGGSLRAHVGVASCAGSTCHGRSAADGAV VRQDELMRWQEESSPSGAHSRAWRVIQEPRGQAIIRRMGLDSAGIQRECAGCHVTPGSARPADGVDCEACHGASGGWLST HYTVGASHARNVAQGMTDLTSPRTKAQVCLDCHFSGDAKGQFIAHRIMAAGHPRISFELDLCTTLQQHHDEDADYVRRKG GKTNSMRMWAVGQAEAVKRSLELFSQPARATDGIFPEFTFYDCHSCHRRIYDGEEGNVTAVPNPGRPVHLGMPPYNDENI IMLLAAARVVAPDAAAGFDARSKAFHRAMGANRAEAVAAAQALRQSADALSSRFASASFTREQTFAIMESIASDAIGERF TDYGGAVQSVMAVDTLLNGLVNQGMVPAGSAGNLRVQINQAYAAVRDPNGFQPFAFRRALGGAVRSIRSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49916; Mature: 49916
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKFIAIRRFAGIGSAFPRSAVMAFAACLAMAGAALGASSLVSPAVQAQGAGGSLRAHV CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHCCCCCCCEEEEC GVASCAGSTCHGRSAADGAVVRQDELMRWQEESSPSGAHSRAWRVIQEPRGQAIIRRMGL CHHHHCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCC DSAGIQRECAGCHVTPGSARPADGVDCEACHGASGGWLSTHYTVGASHARNVAQGMTDLT CCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHC SPRTKAQVCLDCHFSGDAKGQFIAHRIMAAGHPRISFELDLCTTLQQHHDEDADYVRRKG CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHCC GKTNSMRMWAVGQAEAVKRSLELFSQPARATDGIFPEFTFYDCHSCHRRIYDGEEGNVTA CCCCCEEEEECCHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEE VPNPGRPVHLGMPPYNDENIIMLLAAARVVAPDAAAGFDARSKAFHRAMGANRAEAVAAA CCCCCCEEEECCCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH QALRQSADALSSRFASASFTREQTFAIMESIASDAIGERFTDYGGAVQSVMAVDTLLNGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNQGMVPAGSAGNLRVQINQAYAAVRDPNGFQPFAFRRALGGAVRSIRSLR HHCCCCCCCCCCCEEEEEECHHHEECCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDKFIAIRRFAGIGSAFPRSAVMAFAACLAMAGAALGASSLVSPAVQAQGAGGSLRAHV CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHCCCCCCCEEEEC GVASCAGSTCHGRSAADGAVVRQDELMRWQEESSPSGAHSRAWRVIQEPRGQAIIRRMGL CHHHHCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCC DSAGIQRECAGCHVTPGSARPADGVDCEACHGASGGWLSTHYTVGASHARNVAQGMTDLT CCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHC SPRTKAQVCLDCHFSGDAKGQFIAHRIMAAGHPRISFELDLCTTLQQHHDEDADYVRRKG CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHCC GKTNSMRMWAVGQAEAVKRSLELFSQPARATDGIFPEFTFYDCHSCHRRIYDGEEGNVTA CCCCCEEEEECCHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEE VPNPGRPVHLGMPPYNDENIIMLLAAARVVAPDAAAGFDARSKAFHRAMGANRAEAVAAA CCCCCCEEEECCCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH QALRQSADALSSRFASASFTREQTFAIMESIASDAIGERFTDYGGAVQSVMAVDTLLNGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNQGMVPAGSAGNLRVQINQAYAAVRDPNGFQPFAFRRALGGAVRSIRSLR HHCCCCCCCCCCCEEEEEECHHHEECCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA