Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200359
Identifier: 87200359
GI number: 87200359
Start: 2491959
End: 2492348
Strand: Reverse
Name: 87200359
Synonym: Saro_2345
Alternate gene names: NA
Gene position: 2492348-2491959 (Counterclockwise)
Preceding gene: 87200360
Following gene: 87200358
Centisome position: 69.98
GC content: 66.92
Gene sequence:
>390_bases ATGACGCTCATGCACCCCTCATCGGGCGAGCCCTGCCGTGTTCTGGTTCTCGACGATGAGCCACTGATCCTTCTCGACCT GGAATTCGCCGTCGAGGATGCCGGGTGCGAGCCGCTTACCGCGCTCGATCTGGGCGAGGCGCTGTCCATCGTCCAGTCCA CCGCTATTTCCGCCGCAATCCTCGATGTGTCCCTGGGGCAGGGGCAGACCTGCGAACAGGTTGCCCGCACGCTTGCCGGC ATGGGCATTCCCTACGTCCTTCACACCGGAGATCTGGACCGCATGGACGAAGGCGTACGCAAGCTGGGCGGCACGCTCGT GCCCAAGCCCACGCCCGCTGCGGTCGTGGTGGCGCGTGCCCTCGAACCCCTGGCGGCGCGGACGGCCTGA
Upstream 100 bases:
>100_bases TGGACCGCATGTTGGACATGGCAAGGGGTGGAATTGTGCGCGAATGGCATCAGGACGGGCTTCGGGCCCGACTGAACATT CCCCTCCGGGAGAATGCCGA
Downstream 100 bases:
>100_bases GCCTTCGGGCACGCCCGGCAGTTTTGTGCTTGCCAGCGCCGTGCTTCTCGCGCCAATGCCTGCGCGAGTTACGGGTTTTC AACAGCAACGGATTTGGCAG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTLMHPSSGEPCRVLVLDDEPLILLDLEFAVEDAGCEPLTALDLGEALSIVQSTAISAAILDVSLGQGQTCEQVARTLAG MGIPYVLHTGDLDRMDEGVRKLGGTLVPKPTPAAVVVARALEPLAARTA
Sequences:
>Translated_129_residues MTLMHPSSGEPCRVLVLDDEPLILLDLEFAVEDAGCEPLTALDLGEALSIVQSTAISAAILDVSLGQGQTCEQVARTLAG MGIPYVLHTGDLDRMDEGVRKLGGTLVPKPTPAAVVVARALEPLAARTA >Mature_128_residues TLMHPSSGEPCRVLVLDDEPLILLDLEFAVEDAGCEPLTALDLGEALSIVQSTAISAAILDVSLGQGQTCEQVARTLAGM GIPYVLHTGDLDRMDEGVRKLGGTLVPKPTPAAVVVARALEPLAARTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13431; Mature: 13300
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMHPSSGEPCRVLVLDDEPLILLDLEFAVEDAGCEPLTALDLGEALSIVQSTAISAAI CCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHE LDVSLGQGQTCEQVARTLAGMGIPYVLHTGDLDRMDEGVRKLGGTLVPKPTPAAVVVARA EEEECCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LEPLAARTA HHHHHHCCC >Mature Secondary Structure TLMHPSSGEPCRVLVLDDEPLILLDLEFAVEDAGCEPLTALDLGEALSIVQSTAISAAI CCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHE LDVSLGQGQTCEQVARTLAGMGIPYVLHTGDLDRMDEGVRKLGGTLVPKPTPAAVVVARA EEEECCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LEPLAARTA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA