Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199941

Identifier: 87199941

GI number: 87199941

Start: 2036054

End: 2036623

Strand: Reverse

Name: 87199941

Synonym: Saro_1924

Alternate gene names: NA

Gene position: 2036623-2036054 (Counterclockwise)

Preceding gene: 87199942

Following gene: 87199940

Centisome position: 57.18

GC content: 64.39

Gene sequence:

>570_bases
ATGAGGCTTTCCCGTAATCTTCTCGCGCTGGGCGCGGGCCTTGCGATCGCCCAGGCCCAAGTGGCCCAGGCTGCCGCCGC
TGCGCCTGACTGCCTCAGCGAAGGCGAGATGAACGCGCTGGTTGGCTATGCGCTGCCTTCGGTCATCGACGGCGCGATGA
AGGCCTGCAGCCCCCACCTTTCGCCGAACGGATATTTCGCCACGCGCGGCGGCGAGTTCCTCGGTCGCTATGCCTCGCGC
AAGGATGCCAATTGGCCTCTTGCCAAGGCCGCCTTCCTGAAACTGGGCAGCAGCAAGGACGCGAAGCTTGCCGACACCGT
GAAGGACCTGCCCGACGCCGCAGTGCAGCCTTTCGTGGAAGCCATGGTGAGCGAGATGGTTGGCGACCAGATCAAGCCTG
ACCAGTGCACCGCGATCGAGCGCGGCGTACGCATCCTCTCTCCCCTGCCTCCGGAAAACACGGCGGAACTGATCACTTTC
GTGGTGCTTCTCGTCGACAAGCCGAAAGCGGGCAAGGCCTCGTCGTTGCCAATCTGCCAGGCCGCAAGGCCCGGTATCGG
GGCGAAGTAA

Upstream 100 bases:

>100_bases
ACGACGACGGAACGCCTTGGACTGACTGGTCGGGGCGAAGGCATAGCGGCGCAGGCCGTGGCAACAGTTGTCTCGGGCTG
AGCCTGCAGGAGCTTGTAAT

Downstream 100 bases:

>100_bases
GGTCATGGACAGCATTCTCCCCCCCGAAATTGGCGCCCTCGCGCGCCGCGTGATCGAAGAGAACGCAGCGCTCGGACGGA
CCGTGGCGGTTGCGGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRLSRNLLALGAGLAIAQAQVAQAAAAAPDCLSEGEMNALVGYALPSVIDGAMKACSPHLSPNGYFATRGGEFLGRYASR
KDANWPLAKAAFLKLGSSKDAKLADTVKDLPDAAVQPFVEAMVSEMVGDQIKPDQCTAIERGVRILSPLPPENTAELITF
VVLLVDKPKAGKASSLPICQAARPGIGAK

Sequences:

>Translated_189_residues
MRLSRNLLALGAGLAIAQAQVAQAAAAAPDCLSEGEMNALVGYALPSVIDGAMKACSPHLSPNGYFATRGGEFLGRYASR
KDANWPLAKAAFLKLGSSKDAKLADTVKDLPDAAVQPFVEAMVSEMVGDQIKPDQCTAIERGVRILSPLPPENTAELITF
VVLLVDKPKAGKASSLPICQAARPGIGAK
>Mature_189_residues
MRLSRNLLALGAGLAIAQAQVAQAAAAAPDCLSEGEMNALVGYALPSVIDGAMKACSPHLSPNGYFATRGGEFLGRYASR
KDANWPLAKAAFLKLGSSKDAKLADTVKDLPDAAVQPFVEAMVSEMVGDQIKPDQCTAIERGVRILSPLPPENTAELITF
VVLLVDKPKAGKASSLPICQAARPGIGAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19657; Mature: 19657

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSRNLLALGAGLAIAQAQVAQAAAAAPDCLSEGEMNALVGYALPSVIDGAMKACSPHL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SPNGYFATRGGEFLGRYASRKDANWPLAKAAFLKLGSSKDAKLADTVKDLPDAAVQPFVE
CCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHH
AMVSEMVGDQIKPDQCTAIERGVRILSPLPPENTAELITFVVLLVDKPKAGKASSLPICQ
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AARPGIGAK
HCCCCCCCC
>Mature Secondary Structure
MRLSRNLLALGAGLAIAQAQVAQAAAAAPDCLSEGEMNALVGYALPSVIDGAMKACSPHL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SPNGYFATRGGEFLGRYASRKDANWPLAKAAFLKLGSSKDAKLADTVKDLPDAAVQPFVE
CCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHH
AMVSEMVGDQIKPDQCTAIERGVRILSPLPPENTAELITFVVLLVDKPKAGKASSLPICQ
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AARPGIGAK
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA