Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199934

Identifier: 87199934

GI number: 87199934

Start: 2028689

End: 2029042

Strand: Reverse

Name: 87199934

Synonym: Saro_1917

Alternate gene names: NA

Gene position: 2029042-2028689 (Counterclockwise)

Preceding gene: 87199935

Following gene: 87199932

Centisome position: 56.97

GC content: 62.71

Gene sequence:

>354_bases
ATGAGCGAACGCCCCCTCCTCGCCTACAAGGTGCTGACTGCCTCGCAGATGGCGGAGCTTGAGGCGGAGGGGACATTTGC
AGGCGCGCCGATCGATCTCACGGATGGCTACATCCACCTGTCGACCGATGCGCAACTCACCGAGACGGTGGACAAGCACT
TTTCCGGGCAGGACGACTTGCACGTCGTGGCCGTCGACCTTGCTGTACTGGGCGATGCGGTGAAGTGGGAACCTTCGCGC
GGCGGACAGGATTTCCCGCACGTCTATGCAGACCTACCCCTGAATGCGGCAGTGGCCTATGGCCCGCTCGAGCGGGATGA
AGACGGACGGGTCAGATTGCCGATCGCGAGTTGA

Upstream 100 bases:

>100_bases
TCTCGGGCGGGGAACACGTCGTCAGCGCGGTGCGTTTGGCCGAGGAAGAGGGCGCCGAATCCGATGACGTCGGCGCCGTC
CCGGACGAAGGAACGGCAGA

Downstream 100 bases:

>100_bases
CGCCTGGCCTGTCGAACTCACCTCTTGCCCTGAGGGTGGCGATCACGCCCGTGCAGACGAGGAACTGGCCGAAGTAGTAG
AGCGGCCAGATTAGCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSERPLLAYKVLTASQMAELEAEGTFAGAPIDLTDGYIHLSTDAQLTETVDKHFSGQDDLHVVAVDLAVLGDAVKWEPSR
GGQDFPHVYADLPLNAAVAYGPLERDEDGRVRLPIAS

Sequences:

>Translated_117_residues
MSERPLLAYKVLTASQMAELEAEGTFAGAPIDLTDGYIHLSTDAQLTETVDKHFSGQDDLHVVAVDLAVLGDAVKWEPSR
GGQDFPHVYADLPLNAAVAYGPLERDEDGRVRLPIAS
>Mature_116_residues
SERPLLAYKVLTASQMAELEAEGTFAGAPIDLTDGYIHLSTDAQLTETVDKHFSGQDDLHVVAVDLAVLGDAVKWEPSRG
GQDFPHVYADLPLNAAVAYGPLERDEDGRVRLPIAS

Specific function: Unknown

COG id: COG3502

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12619; Mature: 12488

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERPLLAYKVLTASQMAELEAEGTFAGAPIDLTDGYIHLSTDAQLTETVDKHFSGQDDL
CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCCCE
HVVAVDLAVLGDAVKWEPSRGGQDFPHVYADLPLNAAVAYGPLERDEDGRVRLPIAS
EEEEEEEEHHCCCEEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SERPLLAYKVLTASQMAELEAEGTFAGAPIDLTDGYIHLSTDAQLTETVDKHFSGQDDL
CCCCEEEEEEHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCCCE
HVVAVDLAVLGDAVKWEPSRGGQDFPHVYADLPLNAAVAYGPLERDEDGRVRLPIAS
EEEEEEEEHHCCCEEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA