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The map label for this gene is yliI [H]

Identifier: 87199855

GI number: 87199855

Start: 1937510

End: 1938643

Strand: Reverse

Name: yliI [H]

Synonym: Saro_1838

Alternate gene names: 87199855

Gene position: 1938643-1937510 (Counterclockwise)

Preceding gene: 87199859

Following gene: 87199853

Centisome position: 54.43

GC content: 67.46

Gene sequence:

>1134_bases
ATGACGAATCCGATCCTGCGCTCGCTATCGCCTCTCGCTCTTCTCCTCGCAAGTTGCGGCGCTCCGATTTCGGCCCAAGG
ATCGGACGAGGCGGCACAAGGCATGTCGATCACCGACGTCGCGACCTTCGACGAGCCGTGGGCAATGACCTTCCTGCCCG
GAACCGACCTCGCTCTGATCACCGAACGCAAGGGCAAGCTCAAGGTCTGGCGCGAGGGTGAAAGCCGGACGGTGGAGGTC
GCGGGCGCCCCCGTCGTGGACTACGGCGGCCAGGGCGGGCTCGGCGACATCGTCGCGGCGCCCGACTATGCAACCAGCGG
TAAGGTCTATCTAAGCTGGGCCGAGGCGGGTTCGGGCGACGCCCGCGGCGCGGTCGTCGCGGTGGCAAGGCTTGTGCTGG
GCGGCACGCCTCGTCTCGAAGGGCTGGAGGTGATCTGGCGACAGTTCCCGAAAGTCACCGGGCGCGGGCACTACTCTCAC
CGCATCGCATTCTCACCGGACGGCAAGTACCTTTTCGTTTCCTCGGGCGAGCGACAGAAGTTCACCCCCGCGCAAGACCT
GACCGGCAACCTCGGCAAGGTCGTCCGCCTCCTGCCCGACGGGACGCCCGCGCCGGGCAATCCGTTTGCGGACAAGGGCG
GAGTTTCGGCGCAGATCTGGTCCTACGGCCACCGCAACCTGCTCGGCCTCGTCTTCTCGCCCGACGGCCGCCTGTGGGAT
CTCGAGCATGGACCGGCGGGCGGGGACGAGATCAATCTGGTCGAGCCGGGGAAGAACTACGGCTGGCCCCTGGTGTCGGA
CGGCGATCACTACGACGGCAAGCCGATCCCGCGCCACAAGACCCGACCCGACCTCGCCGCCCCGGCGATAAGCTGGAACC
CGGTGATCGCGCCGGGGGACATGATCTTCTACACTGGCAAGGCATTCCCGCAGTGGCAGGGGCAGGCCCTGATCGCGGGG
CTCGGCTCGGGGGGCATCGTGCGCGTCGCTATCGAGGGCGACAAGGCCCGCGAAGTGGAGCGCATCGACCTCGGCAACCG
CATCCGCGAGATAGAGCAGGCACCCGACGGATCGCTCTACGTGTTGGAAGACGGCGAAGGCGCGCGGCTTCGCCACCTGT
CCCCAAAGAGCTAG

Upstream 100 bases:

>100_bases
CGGCCCCGCCAAGGGCCCACGACCAGCCTCGTCCACGCCGATGGTGACCATGGACGAAAAGGAAGTGGCACAAGTGGCAT
TCGGGAGCATTGTGAGAGCC

Downstream 100 bases:

>100_bases
GCCGTTCTGCCTCAAACCTCGATGGCGCCCTCCATGAGTTTACGACCTAGAACCCCGCCGTCCAGCGCACCGCCCCGCCG
GCATCGTCGGGCGCGGCGGC

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTNPILRSLSPLALLLASCGAPISAQGSDEAAQGMSITDVATFDEPWAMTFLPGTDLALITERKGKLKVWREGESRTVEV
AGAPVVDYGGQGGLGDIVAAPDYATSGKVYLSWAEAGSGDARGAVVAVARLVLGGTPRLEGLEVIWRQFPKVTGRGHYSH
RIAFSPDGKYLFVSSGERQKFTPAQDLTGNLGKVVRLLPDGTPAPGNPFADKGGVSAQIWSYGHRNLLGLVFSPDGRLWD
LEHGPAGGDEINLVEPGKNYGWPLVSDGDHYDGKPIPRHKTRPDLAAPAISWNPVIAPGDMIFYTGKAFPQWQGQALIAG
LGSGGIVRVAIEGDKAREVERIDLGNRIREIEQAPDGSLYVLEDGEGARLRHLSPKS

Sequences:

>Translated_377_residues
MTNPILRSLSPLALLLASCGAPISAQGSDEAAQGMSITDVATFDEPWAMTFLPGTDLALITERKGKLKVWREGESRTVEV
AGAPVVDYGGQGGLGDIVAAPDYATSGKVYLSWAEAGSGDARGAVVAVARLVLGGTPRLEGLEVIWRQFPKVTGRGHYSH
RIAFSPDGKYLFVSSGERQKFTPAQDLTGNLGKVVRLLPDGTPAPGNPFADKGGVSAQIWSYGHRNLLGLVFSPDGRLWD
LEHGPAGGDEINLVEPGKNYGWPLVSDGDHYDGKPIPRHKTRPDLAAPAISWNPVIAPGDMIFYTGKAFPQWQGQALIAG
LGSGGIVRVAIEGDKAREVERIDLGNRIREIEQAPDGSLYVLEDGEGARLRHLSPKS
>Mature_376_residues
TNPILRSLSPLALLLASCGAPISAQGSDEAAQGMSITDVATFDEPWAMTFLPGTDLALITERKGKLKVWREGESRTVEVA
GAPVVDYGGQGGLGDIVAAPDYATSGKVYLSWAEAGSGDARGAVVAVARLVLGGTPRLEGLEVIWRQFPKVTGRGHYSHR
IAFSPDGKYLFVSSGERQKFTPAQDLTGNLGKVVRLLPDGTPAPGNPFADKGGVSAQIWSYGHRNLLGLVFSPDGRLWDL
EHGPAGGDEINLVEPGKNYGWPLVSDGDHYDGKPIPRHKTRPDLAAPAISWNPVIAPGDMIFYTGKAFPQWQGQALIAGL
GSGGIVRVAIEGDKAREVERIDLGNRIREIEQAPDGSLYVLEDGEGARLRHLSPKS

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=341, Percent_Identity=40.4692082111437, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 40147; Mature: 40016

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPILRSLSPLALLLASCGAPISAQGSDEAAQGMSITDVATFDEPWAMTFLPGTDLALI
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCCCEEEE
TERKGKLKVWREGESRTVEVAGAPVVDYGGQGGLGDIVAAPDYATSGKVYLSWAEAGSGD
ECCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCCC
ARGAVVAVARLVLGGTPRLEGLEVIWRQFPKVTGRGHYSHRIAFSPDGKYLFVSSGERQK
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCC
FTPAQDLTGNLGKVVRLLPDGTPAPGNPFADKGGVSAQIWSYGHRNLLGLVFSPDGRLWD
CCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE
LEHGPAGGDEINLVEPGKNYGWPLVSDGDHYDGKPIPRHKTRPDLAAPAISWNPVIAPGD
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
MIFYTGKAFPQWQGQALIAGLGSGGIVRVAIEGDKAREVERIDLGNRIREIEQAPDGSLY
EEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
VLEDGEGARLRHLSPKS
EEECCCCCEEECCCCCC
>Mature Secondary Structure 
TNPILRSLSPLALLLASCGAPISAQGSDEAAQGMSITDVATFDEPWAMTFLPGTDLALI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCCCEEEE
TERKGKLKVWREGESRTVEVAGAPVVDYGGQGGLGDIVAAPDYATSGKVYLSWAEAGSGD
ECCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCCC
ARGAVVAVARLVLGGTPRLEGLEVIWRQFPKVTGRGHYSHRIAFSPDGKYLFVSSGERQK
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCC
FTPAQDLTGNLGKVVRLLPDGTPAPGNPFADKGGVSAQIWSYGHRNLLGLVFSPDGRLWD
CCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE
LEHGPAGGDEINLVEPGKNYGWPLVSDGDHYDGKPIPRHKTRPDLAAPAISWNPVIAPGD
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
MIFYTGKAFPQWQGQALIAGLGSGGIVRVAIEGDKAREVERIDLGNRIREIEQAPDGSLY
EEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
VLEDGEGARLRHLSPKS
EEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]