Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199822

Identifier: 87199822

GI number: 87199822

Start: 1904223

End: 1905068

Strand: Reverse

Name: 87199822

Synonym: Saro_1805

Alternate gene names: NA

Gene position: 1905068-1904223 (Counterclockwise)

Preceding gene: 87199823

Following gene: 87199821

Centisome position: 53.49

GC content: 68.2

Gene sequence:

>846_bases
GTGAAGCTCTTCGCGCGCCGCTGCGCCCCAGTACTTCTCGCCCTTGCCGGGCTGGCTCCGGCGGCTACGGTCGCGCGGGA
AGCACCGCTGGCCGAAGGCGCGCGTTACGTTGCGCTGGGAAGCTCCTTCGCCGCAGGTCCGGGCGTGGGGCCCAACGCGC
CCGGATCGCCCGAACGCTGCGGCCGGGGCACGCTCAACTACCCGCACCTGCTCGCCGAGGCGCTCAAGCTCGATCTCGTC
GATGCGACCTGCAGCGGCGCGACGACCCACCACGTGCTGGGCCCCTGGAACGAGGTTCCCCCTCAGATCGACAGCGTGAA
TGGCGACACCCGCCTCGTCACCCTGACCATCGGCGGAAACGATGTGTCGTTCGTCGGCAACATCTTCGCCGCCGCTTGCG
AGAAGATGGCGTCGCCCGATCCGCGCTGCGGCAAGTGGCGGGAGATCACCGAGGAAGAGTGGCAGGCCGACGAGGAGCGG
ATGCGCTCCATCGTACGCCAGATCCACGCCCGCGCGCCTCTCGCCCGGGTGGTGGTGGTCGATTACATCACGGTCCTGCC
GCCATCAGGCACTTGCGCTGCCATGGCGATTTCGCCGGACCGGCTGGCCCAGAGCCGCAGCGCCGCGAAACGGCTTGCCC
GGATTACCGCACGGGTCGCGCGAGAAGAGGGTGCATCGCTGCTCAAGTTCTCGCATATCTCGCGCCGGCACCATCCATGC
TCTGCCAAGCCCTGGAGCAACGGCCTTTCCGCCCCGGCCGACGACGGCATCCCGGTCCATCCGAACCGGCTCGGACATGC
TGAAGCGGCAGCGGCGCTGGTCAAGCTTGTGAAATTGATGAAGTAG

Upstream 100 bases:

>100_bases
TGCTCGACACCAAGGTGCACCTGTTCCTGCATGTGAAGGTCGACGAGCGCTGGGCCGACGCCAAGGAAATCTACGAGGAA
ATCGGCCTCGAATGGGTCAA

Downstream 100 bases:

>100_bases
CTACTGCACTGATTTCAAATAGTATTGCCTGTCAGCTTTCCAGCCCGGATTGTTGCAGCGCAACAGAAACTTGTCCGTAA
TGGATTGATGGTTTATGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Extracellular lipase; GDSL-like lipase; SRL [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERCGRGTLNYPHLLAEALKLDLV
DATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGNDVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEER
MRSIVRQIHARAPLARVVVVDYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC
SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK

Sequences:

>Translated_281_residues
MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERCGRGTLNYPHLLAEALKLDLV
DATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGNDVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEER
MRSIVRQIHARAPLARVVVVDYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC
SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK
>Mature_281_residues
MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERCGRGTLNYPHLLAEALKLDLV
DATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGNDVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEER
MRSIVRQIHARAPLARVVVVDYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC
SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK

Specific function: Enzyme is most active on medium length p-nitrophenyl esters (with C8 to C12 acyl chains) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831 [H]

Pfam domain/function: NA

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 29799; Mature: 29799

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERC
CCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCCCCHHHC
GRGTLNYPHLLAEALKLDLVDATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
DVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEERMRSIVRQIHARAPLARVVVV
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH
DYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC
HHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERC
CCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCCCCHHHC
GRGTLNYPHLLAEALKLDLVDATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
DVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEERMRSIVRQIHARAPLARVVVV
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH
DYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC
HHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12115057 [H]