Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199822
Identifier: 87199822
GI number: 87199822
Start: 1904223
End: 1905068
Strand: Reverse
Name: 87199822
Synonym: Saro_1805
Alternate gene names: NA
Gene position: 1905068-1904223 (Counterclockwise)
Preceding gene: 87199823
Following gene: 87199821
Centisome position: 53.49
GC content: 68.2
Gene sequence:
>846_bases GTGAAGCTCTTCGCGCGCCGCTGCGCCCCAGTACTTCTCGCCCTTGCCGGGCTGGCTCCGGCGGCTACGGTCGCGCGGGA AGCACCGCTGGCCGAAGGCGCGCGTTACGTTGCGCTGGGAAGCTCCTTCGCCGCAGGTCCGGGCGTGGGGCCCAACGCGC CCGGATCGCCCGAACGCTGCGGCCGGGGCACGCTCAACTACCCGCACCTGCTCGCCGAGGCGCTCAAGCTCGATCTCGTC GATGCGACCTGCAGCGGCGCGACGACCCACCACGTGCTGGGCCCCTGGAACGAGGTTCCCCCTCAGATCGACAGCGTGAA TGGCGACACCCGCCTCGTCACCCTGACCATCGGCGGAAACGATGTGTCGTTCGTCGGCAACATCTTCGCCGCCGCTTGCG AGAAGATGGCGTCGCCCGATCCGCGCTGCGGCAAGTGGCGGGAGATCACCGAGGAAGAGTGGCAGGCCGACGAGGAGCGG ATGCGCTCCATCGTACGCCAGATCCACGCCCGCGCGCCTCTCGCCCGGGTGGTGGTGGTCGATTACATCACGGTCCTGCC GCCATCAGGCACTTGCGCTGCCATGGCGATTTCGCCGGACCGGCTGGCCCAGAGCCGCAGCGCCGCGAAACGGCTTGCCC GGATTACCGCACGGGTCGCGCGAGAAGAGGGTGCATCGCTGCTCAAGTTCTCGCATATCTCGCGCCGGCACCATCCATGC TCTGCCAAGCCCTGGAGCAACGGCCTTTCCGCCCCGGCCGACGACGGCATCCCGGTCCATCCGAACCGGCTCGGACATGC TGAAGCGGCAGCGGCGCTGGTCAAGCTTGTGAAATTGATGAAGTAG
Upstream 100 bases:
>100_bases TGCTCGACACCAAGGTGCACCTGTTCCTGCATGTGAAGGTCGACGAGCGCTGGGCCGACGCCAAGGAAATCTACGAGGAA ATCGGCCTCGAATGGGTCAA
Downstream 100 bases:
>100_bases CTACTGCACTGATTTCAAATAGTATTGCCTGTCAGCTTTCCAGCCCGGATTGTTGCAGCGCAACAGAAACTTGTCCGTAA TGGATTGATGGTTTATGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Extracellular lipase; GDSL-like lipase; SRL [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERCGRGTLNYPHLLAEALKLDLV DATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGNDVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEER MRSIVRQIHARAPLARVVVVDYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK
Sequences:
>Translated_281_residues MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERCGRGTLNYPHLLAEALKLDLV DATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGNDVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEER MRSIVRQIHARAPLARVVVVDYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK >Mature_281_residues MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERCGRGTLNYPHLLAEALKLDLV DATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGNDVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEER MRSIVRQIHARAPLARVVVVDYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK
Specific function: Enzyme is most active on medium length p-nitrophenyl esters (with C8 to C12 acyl chains) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: NA
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 29799; Mature: 29799
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERC CCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCCCCHHHC GRGTLNYPHLLAEALKLDLVDATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGN CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC DVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEERMRSIVRQIHARAPLARVVVV CHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH DYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC HHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MKLFARRCAPVLLALAGLAPAATVAREAPLAEGARYVALGSSFAAGPGVGPNAPGSPERC CCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCCCCHHHC GRGTLNYPHLLAEALKLDLVDATCSGATTHHVLGPWNEVPPQIDSVNGDTRLVTLTIGGN CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC DVSFVGNIFAAACEKMASPDPRCGKWREITEEEWQADEERMRSIVRQIHARAPLARVVVV CHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH DYITVLPPSGTCAAMAISPDRLAQSRSAAKRLARITARVAREEGASLLKFSHISRRHHPC HHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC SAKPWSNGLSAPADDGIPVHPNRLGHAEAAAALVKLVKLMK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12115057 [H]