Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199778

Identifier: 87199778

GI number: 87199778

Start: 1857280

End: 1857633

Strand: Reverse

Name: 87199778

Synonym: Saro_1761

Alternate gene names: NA

Gene position: 1857633-1857280 (Counterclockwise)

Preceding gene: 87199779

Following gene: 87199773

Centisome position: 52.16

GC content: 64.41

Gene sequence:

>354_bases
ATGAACACCACCGATTGGAATACGAGTGTCTATGGGCAAGCCGCGCTGGAAGACCGGTGCGCGCCCAGGCAACGCGTCAA
CATTCCGGCATCGCTGCGACCATCCGGCGGGCGCGGCTTCCAGACCGTCGTACTGGATCTGTCGCTTGGCGGATTCTGCG
CCAACGCGCTGCAGAAGATGTACCCCGGCAATCGCTGCTGGCTGACGATCCCCGGCATGGAAGCGCTTCAGGCCGAAGTG
GTGTGGTGGGATGCGGGCCGCGTCGGATGCGCCTTCGCGAACCTGCTAAGCCCCATCGTCCACGACAACATCCTCGCCCG
CTATCGTGGCGACGGCGTGTTCCGGCGGGTGTAA

Upstream 100 bases:

>100_bases
AACCAGGACTGACAGCCGCGAATTAACGGAAATCGGCGATTCTCTGCGCTTCCGGGAGGAATCCTTTCCGGGCAGATGAA
ACGGGTCCGGGACGTTCGGC

Downstream 100 bases:

>100_bases
ACCGGGCCTAGCCGGCCTTGACCAGCGTCACCTGGCTGACATTGATCCCGCCGCCGCGAAAGCCACCTTCGCAATACATC
AGGTAATAGCGCCATAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKMYPGNRCWLTIPGMEALQAEV
VWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV

Sequences:

>Translated_117_residues
MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKMYPGNRCWLTIPGMEALQAEV
VWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV
>Mature_117_residues
MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKMYPGNRCWLTIPGMEALQAEV
VWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12898; Mature: 12898

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKM
CCCCCCCCEEECCHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH
YPGNRCWLTIPGMEALQAEVVWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV
CCCCEEEEEECCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCEEEECC
>Mature Secondary Structure
MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKM
CCCCCCCCEEECCHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH
YPGNRCWLTIPGMEALQAEVVWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV
CCCCEEEEEECCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA