Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199778
Identifier: 87199778
GI number: 87199778
Start: 1857280
End: 1857633
Strand: Reverse
Name: 87199778
Synonym: Saro_1761
Alternate gene names: NA
Gene position: 1857633-1857280 (Counterclockwise)
Preceding gene: 87199779
Following gene: 87199773
Centisome position: 52.16
GC content: 64.41
Gene sequence:
>354_bases ATGAACACCACCGATTGGAATACGAGTGTCTATGGGCAAGCCGCGCTGGAAGACCGGTGCGCGCCCAGGCAACGCGTCAA CATTCCGGCATCGCTGCGACCATCCGGCGGGCGCGGCTTCCAGACCGTCGTACTGGATCTGTCGCTTGGCGGATTCTGCG CCAACGCGCTGCAGAAGATGTACCCCGGCAATCGCTGCTGGCTGACGATCCCCGGCATGGAAGCGCTTCAGGCCGAAGTG GTGTGGTGGGATGCGGGCCGCGTCGGATGCGCCTTCGCGAACCTGCTAAGCCCCATCGTCCACGACAACATCCTCGCCCG CTATCGTGGCGACGGCGTGTTCCGGCGGGTGTAA
Upstream 100 bases:
>100_bases AACCAGGACTGACAGCCGCGAATTAACGGAAATCGGCGATTCTCTGCGCTTCCGGGAGGAATCCTTTCCGGGCAGATGAA ACGGGTCCGGGACGTTCGGC
Downstream 100 bases:
>100_bases ACCGGGCCTAGCCGGCCTTGACCAGCGTCACCTGGCTGACATTGATCCCGCCGCCGCGAAAGCCACCTTCGCAATACATC AGGTAATAGCGCCATAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKMYPGNRCWLTIPGMEALQAEV VWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV
Sequences:
>Translated_117_residues MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKMYPGNRCWLTIPGMEALQAEV VWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV >Mature_117_residues MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKMYPGNRCWLTIPGMEALQAEV VWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12898; Mature: 12898
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKM CCCCCCCCEEECCHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH YPGNRCWLTIPGMEALQAEVVWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV CCCCEEEEEECCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCEEEECC >Mature Secondary Structure MNTTDWNTSVYGQAALEDRCAPRQRVNIPASLRPSGGRGFQTVVLDLSLGGFCANALQKM CCCCCCCCEEECCHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH YPGNRCWLTIPGMEALQAEVVWWDAGRVGCAFANLLSPIVHDNILARYRGDGVFRRV CCCCEEEEEECCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA