Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199717
Identifier: 87199717
GI number: 87199717
Start: 1785131
End: 1785691
Strand: Reverse
Name: 87199717
Synonym: Saro_1700
Alternate gene names: NA
Gene position: 1785691-1785131 (Counterclockwise)
Preceding gene: 87199718
Following gene: 87199715
Centisome position: 50.14
GC content: 67.56
Gene sequence:
>561_bases GTGAGCGAAAGCGACTTCGCGGTTCTTCTGCTCGCGGCCGGCAGGGGATCGCGGTTCGGAGGCGGCAAGCTGGCCGCGCC CCTTGCGGGCAAACCCCTTTCCCGCCACGCAAGCGACCGCCTCGCCACATTGCCGGCCCGGCGACATCTTGCCATCTGCT CCGCCCAAACTCCTGAATTACCGGGATTTGATCGCCTGATCCTGACGCCGCCAGACGCCCCCCTCGCGACCTCCATCGCA ACCGGGATCTCAACGCTGGGCCCGGCATCGGCGGTGCTGATAGCCCTTGCCGACATGCCACTTGTCCCAACCCGCCATTT CCAGGCACTGCTCGCCGCGTTCGACGGCGACAGGATCGCGAGCCGGGTCGACGGACGGCTGATGGTGCCGGCCGTGTTCG GATGCCGCCATTTCGGCGCCTTGCTGGAACTGGAGGGAGACCGGGGCGCGGGCGCGCTTCTGCACGATGCTCAGGGGGTG GATTTGCAGGCATCGCTCGCGGTCGATATCGACACGGCCGCGGACCTTCAGCGCGTCGCAGGTGCGGTCAGGTGCGTTTA G
Upstream 100 bases:
>100_bases CGCTGGCCCTGTCTATCCTTGGAGAGATAGTGCCTGAATACAACGCCTTGGCTCATTGGGCTACGTGGATGGGTGAGCCG CTCCTGACCGCCGCTGCGAC
Downstream 100 bases:
>100_bases GTGCCGTTCGGGTCACGGCGCATTCGGCCTCAATCGATGGGGATGCCGTTGGCGATGAAGAAGTCCGCAACTTCGCCAAG GTGCGCTTCATAGGGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSESDFAVLLLAAGRGSRFGGGKLAAPLAGKPLSRHASDRLATLPARRHLAICSAQTPELPGFDRLILTPPDAPLATSIA TGISTLGPASAVLIALADMPLVPTRHFQALLAAFDGDRIASRVDGRLMVPAVFGCRHFGALLELEGDRGAGALLHDAQGV DLQASLAVDIDTAADLQRVAGAVRCV
Sequences:
>Translated_186_residues MSESDFAVLLLAAGRGSRFGGGKLAAPLAGKPLSRHASDRLATLPARRHLAICSAQTPELPGFDRLILTPPDAPLATSIA TGISTLGPASAVLIALADMPLVPTRHFQALLAAFDGDRIASRVDGRLMVPAVFGCRHFGALLELEGDRGAGALLHDAQGV DLQASLAVDIDTAADLQRVAGAVRCV >Mature_185_residues SESDFAVLLLAAGRGSRFGGGKLAAPLAGKPLSRHASDRLATLPARRHLAICSAQTPELPGFDRLILTPPDAPLATSIAT GISTLGPASAVLIALADMPLVPTRHFQALLAAFDGDRIASRVDGRLMVPAVFGCRHFGALLELEGDRGAGALLHDAQGVD LQASLAVDIDTAADLQRVAGAVRCV
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19160; Mature: 19029
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESDFAVLLLAAGRGSRFGGGKLAAPLAGKPLSRHASDRLATLPARRHLAICSAQTPEL CCCCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC PGFDRLILTPPDAPLATSIATGISTLGPASAVLIALADMPLVPTRHFQALLAAFDGDRIA CCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHH SRVDGRLMVPAVFGCRHFGALLELEGDRGAGALLHDAQGVDLQASLAVDIDTAADLQRVA HHCCCEEEEHHHHHHHHHCEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCHHHHHHHH GAVRCV HHHCCC >Mature Secondary Structure SESDFAVLLLAAGRGSRFGGGKLAAPLAGKPLSRHASDRLATLPARRHLAICSAQTPEL CCCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC PGFDRLILTPPDAPLATSIATGISTLGPASAVLIALADMPLVPTRHFQALLAAFDGDRIA CCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHH SRVDGRLMVPAVFGCRHFGALLELEGDRGAGALLHDAQGVDLQASLAVDIDTAADLQRVA HHCCCEEEEHHHHHHHHHCEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCHHHHHHHH GAVRCV HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA