Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199615
Identifier: 87199615
GI number: 87199615
Start: 1662011
End: 1662445
Strand: Reverse
Name: 87199615
Synonym: Saro_1598
Alternate gene names: NA
Gene position: 1662445-1662011 (Counterclockwise)
Preceding gene: 87199618
Following gene: 87199614
Centisome position: 46.68
GC content: 64.37
Gene sequence:
>435_bases ATGCGCACTTTCACTGCCGCCATCCTGCTCGCGTGCCTGATTGCGCCAGCCAGCGCCCCTGCCGGGGCGGTGGCCCAGCC ATCGGGCGATCCCGTGACGGGCCTGTGGATCAACCCATATCACAGCGTCGCCGTGCGCAACCATTTCTGTGGCAACGCGC TCTGCGGCCAGGTGGTCTGGGCAAGCCCCGATGCACAGGCCGATGCGCATGAAAGCGGCGTCTCCAACCTCATCGGCCTC GACCTGCTCCAGAACTACCATGCACACAGTCCCGGAACCTGGAAGGGCGTCGTCCTCGTCCCCGACATGGGTCGCAAGTT CAGTTCGCAGATCGAAGTCCTGTCACCGAGTCGCATCCGCATTTCCGGCTGCATCCTGCACGGGCTGATCTGCAAGTCGC AGGTGTGGACGCGTATCGGCGAGCTGCCCAGATGA
Upstream 100 bases:
>100_bases ATCGCGAGGGATTGGCCCCAACATTGCCGATTTTTCATGTTGGCTCCACGAGGCGGCAAGGCAGGGTTGCATAGCAAGGG GCCATCGGAAGGACCTCGCG
Downstream 100 bases:
>100_bases ACCGCCGCCTGACCGTCACCCCGCGCCAGCGCCGCATTCTGGCCAGCCTATTCGTGCTGCTCCTCGCCGCCGTCGCATTT GTCGCTCTCGACCGGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRTFTAAILLACLIAPASAPAGAVAQPSGDPVTGLWINPYHSVAVRNHFCGNALCGQVVWASPDAQADAHESGVSNLIGL DLLQNYHAHSPGTWKGVVLVPDMGRKFSSQIEVLSPSRIRISGCILHGLICKSQVWTRIGELPR
Sequences:
>Translated_144_residues MRTFTAAILLACLIAPASAPAGAVAQPSGDPVTGLWINPYHSVAVRNHFCGNALCGQVVWASPDAQADAHESGVSNLIGL DLLQNYHAHSPGTWKGVVLVPDMGRKFSSQIEVLSPSRIRISGCILHGLICKSQVWTRIGELPR >Mature_144_residues MRTFTAAILLACLIAPASAPAGAVAQPSGDPVTGLWINPYHSVAVRNHFCGNALCGQVVWASPDAQADAHESGVSNLIGL DLLQNYHAHSPGTWKGVVLVPDMGRKFSSQIEVLSPSRIRISGCILHGLICKSQVWTRIGELPR
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15305; Mature: 15305
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFTAAILLACLIAPASAPAGAVAQPSGDPVTGLWINPYHSVAVRNHFCGNALCGQVVW CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCHHCCEEE ASPDAQADAHESGVSNLIGLDLLQNYHAHSPGTWKGVVLVPDMGRKFSSQIEVLSPSRIR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCEEECCCCEEE ISGCILHGLICKSQVWTRIGELPR HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRTFTAAILLACLIAPASAPAGAVAQPSGDPVTGLWINPYHSVAVRNHFCGNALCGQVVW CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCHHCCEEE ASPDAQADAHESGVSNLIGLDLLQNYHAHSPGTWKGVVLVPDMGRKFSSQIEVLSPSRIR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCEEECCCCEEE ISGCILHGLICKSQVWTRIGELPR HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA