Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87199600
Identifier: 87199600
GI number: 87199600
Start: 1640051
End: 1641124
Strand: Reverse
Name: 87199600
Synonym: Saro_1583
Alternate gene names: NA
Gene position: 1641124-1640051 (Counterclockwise)
Preceding gene: 87199601
Following gene: 87199599
Centisome position: 46.08
GC content: 65.36
Gene sequence:
>1074_bases ATGCGCACGCTCTGCATTGCCATTGCCCTGTCCGTGTGCGCAATGCTTCCGGCCTCGTCACGCGCCGGAAGCGACGCCTG TCCGGTCGATGAGGAACTTGCGTACGTCTGCGGTCTGCAAAGGCCGGAGGACATCGTTGCCTTGCCGGAGGTTCCTTGGC TTGTAGCGAGCGGCTTCAGCACCGGAGCCGGGCTCAAACTGATCGATACCCGCAGCCGAAGCGTAGAGCGATGGTTCGAG GCTTCGCCCGGCCAATTAAACCCGGACCGCCGGACCTTCCCCGATTGCCCCGGTCCGGTGAACCCGGCCCTGTTCAACGC GCGCGGCCTCTCGCTTCGGCAGACCGGACCGGGCAGCTATCGGCTGCTCGTGGTCAATCACGGAGGACGCGAGTCCATAG AAGCTTTCGATGTAGCAACAGGCGGTTCGAAACCGCGCGTGACTTGGCGGGGATGCGTGCCCATGCCCGTCGACCAGGTC GCGAACAGCGTTGCGCAGTTCGCTGACGGGACAGTCCTTGCGACCGTCCTGACCAGCCCCGGCACGACCATCGGCGATTT CATGCTTGGCCGGTCGACCGGCGCCGTCTGGCAATGGAAGGCGGGACAATCCAGGTTCGAGGAACTGCCCGGTACGCGGT TGCCGGGGAACAACGGGATCGAGACCGACCCGGACCAGAAGCGCTTCTACGTCGTTGCATTCGGCTGGCACTCGGTGGTC GTCTTCGACCGCCGCGACACAGCCGCGCCCCTCGCCCGCATCGAAGCCGCGGACTTCATGCCGGACAATATCCACTGGAC TGGCGGACGCCTTCTCATCGCCGGAATGCGCCTCGACGAGCCGGCCTGCGGCGGCTTGCGCAAGGTGGTGGACGGCGTTG CCGATCCGATGCTGTGCCACCGTGGCTGGATCGTGGGCGAAGTGGACCTCGATGCCCGCCGTGTCTCCACGCTTGCCTAT GGCCGACCGCGCAAGGCGTTCAACGGCCTCTCGGCTGCCGCGCTCAGCGGAGGAGAATTGTGGCTTGGGTCATTCCAGTC CGACAGGCTTGCCGTCTTGCCAAGGCAGGATTGA
Upstream 100 bases:
>100_bases AGACGCAGGTCGTTGCCTGGCCAAATCTCGTGGCGATGAACCTCCTGCGGACGCCGCTGCTCGAACCGCGCGCGGCCGGA ACCAAGCCGCGCGACTGACG
Downstream 100 bases:
>100_bases AGAGCGCAAACGATCCAGGAATGGACAGTATCAACGCCTTCCGAAGAATGACCCCAGACGGCCTCCACCGCGCGAAGGAT GGGGCGCACCGGACGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MRTLCIAIALSVCAMLPASSRAGSDACPVDEELAYVCGLQRPEDIVALPEVPWLVASGFSTGAGLKLIDTRSRSVERWFE ASPGQLNPDRRTFPDCPGPVNPALFNARGLSLRQTGPGSYRLLVVNHGGRESIEAFDVATGGSKPRVTWRGCVPMPVDQV ANSVAQFADGTVLATVLTSPGTTIGDFMLGRSTGAVWQWKAGQSRFEELPGTRLPGNNGIETDPDQKRFYVVAFGWHSVV VFDRRDTAAPLARIEAADFMPDNIHWTGGRLLIAGMRLDEPACGGLRKVVDGVADPMLCHRGWIVGEVDLDARRVSTLAY GRPRKAFNGLSAAALSGGELWLGSFQSDRLAVLPRQD
Sequences:
>Translated_357_residues MRTLCIAIALSVCAMLPASSRAGSDACPVDEELAYVCGLQRPEDIVALPEVPWLVASGFSTGAGLKLIDTRSRSVERWFE ASPGQLNPDRRTFPDCPGPVNPALFNARGLSLRQTGPGSYRLLVVNHGGRESIEAFDVATGGSKPRVTWRGCVPMPVDQV ANSVAQFADGTVLATVLTSPGTTIGDFMLGRSTGAVWQWKAGQSRFEELPGTRLPGNNGIETDPDQKRFYVVAFGWHSVV VFDRRDTAAPLARIEAADFMPDNIHWTGGRLLIAGMRLDEPACGGLRKVVDGVADPMLCHRGWIVGEVDLDARRVSTLAY GRPRKAFNGLSAAALSGGELWLGSFQSDRLAVLPRQD >Mature_357_residues MRTLCIAIALSVCAMLPASSRAGSDACPVDEELAYVCGLQRPEDIVALPEVPWLVASGFSTGAGLKLIDTRSRSVERWFE ASPGQLNPDRRTFPDCPGPVNPALFNARGLSLRQTGPGSYRLLVVNHGGRESIEAFDVATGGSKPRVTWRGCVPMPVDQV ANSVAQFADGTVLATVLTSPGTTIGDFMLGRSTGAVWQWKAGQSRFEELPGTRLPGNNGIETDPDQKRFYVVAFGWHSVV VFDRRDTAAPLARIEAADFMPDNIHWTGGRLLIAGMRLDEPACGGLRKVVDGVADPMLCHRGWIVGEVDLDARRVSTLAY GRPRKAFNGLSAAALSGGELWLGSFQSDRLAVLPRQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38416; Mature: 38416
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLCIAIALSVCAMLPASSRAGSDACPVDEELAYVCGLQRPEDIVALPEVPWLVASGFS CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCEEEECCCC TGAGLKLIDTRSRSVERWFEASPGQLNPDRRTFPDCPGPVNPALFNARGLSLRQTGPGSY CCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCE RLLVVNHGGRESIEAFDVATGGSKPRVTWRGCVPMPVDQVANSVAQFADGTVLATVLTSP EEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCC GTTIGDFMLGRSTGAVWQWKAGQSRFEELPGTRLPGNNGIETDPDQKRFYVVAFGWHSVV CCCHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEE VFDRRDTAAPLARIEAADFMPDNIHWTGGRLLIAGMRLDEPACGGLRKVVDGVADPMLCH EEECCCCCCHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCHHHHHHHHHCCCHHHH RGWIVGEVDLDARRVSTLAYGRPRKAFNGLSAAALSGGELWLGSFQSDRLAVLPRQD CCEEEEEECCCHHHHHHHHCCCCHHHHCCCCHHHCCCCEEEEECCCCCCEEEEECCC >Mature Secondary Structure MRTLCIAIALSVCAMLPASSRAGSDACPVDEELAYVCGLQRPEDIVALPEVPWLVASGFS CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCEEEECCCC TGAGLKLIDTRSRSVERWFEASPGQLNPDRRTFPDCPGPVNPALFNARGLSLRQTGPGSY CCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCE RLLVVNHGGRESIEAFDVATGGSKPRVTWRGCVPMPVDQVANSVAQFADGTVLATVLTSP EEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCC GTTIGDFMLGRSTGAVWQWKAGQSRFEELPGTRLPGNNGIETDPDQKRFYVVAFGWHSVV CCCHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEE VFDRRDTAAPLARIEAADFMPDNIHWTGGRLLIAGMRLDEPACGGLRKVVDGVADPMLCH EEECCCCCCHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCHHHHHHHHHCCCHHHH RGWIVGEVDLDARRVSTLAYGRPRKAFNGLSAAALSGGELWLGSFQSDRLAVLPRQD CCEEEEEECCCHHHHHHHHCCCCHHHHCCCCHHHCCCCEEEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA