Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199571

Identifier: 87199571

GI number: 87199571

Start: 1610570

End: 1611058

Strand: Reverse

Name: 87199571

Synonym: Saro_1554

Alternate gene names: NA

Gene position: 1611058-1610570 (Counterclockwise)

Preceding gene: 87199575

Following gene: 87199570

Centisome position: 45.23

GC content: 64.83

Gene sequence:

>489_bases
TTGGGGGAACGCATCGTGCGGCTTGACGACGGCCTGTTTGAATTCCTGCACCGCCCGCTGATGTGCATCATTGCGGGCGT
GGACCGACAGGGTCGTCCATCGGCCGGGCGCGGAATAGGTCTTCACGTGCCGGACGATCGGGAGACGATGGACGTGATCT
TTTCGGCGTGGCAGTGGCCGCAACTGGAAGCCGCGATTGGCGAGACCGCCCGGCTGGCCGTCACGTTCGTGAGCCCCGCC
GACTACGTGACGTTCCAGATCAAGGGGCCTGCCAGGCTGCGCGATGCCGAAGACGACGACCTCGCCCGGTCGGACAAGTT
CATTGCCGATGCCACCGGGGCACTCGTTTCGCTTGGGGTGCCTGCCGAAATCATTCCGCCATGGCTGACCACTCGCGGGG
CGAAAGTGGCACGGCTCGACATCAGTGAAATCTACGTCCAGACGCCCGGGCCACAGGCCGGCCTACTGGCCAGCATGAGG
CAGCCATGA

Upstream 100 bases:

>100_bases
TCACATCGACACGCTCAATAGACGGTACGAAACGGCCGCGTTCCTAAATGATTGCGAAAAGCATGGGCGATTTCCTAAAA
CCTCCCTAAACGCCAGGTGT

Downstream 100 bases:

>100_bases
AACTGCGCCTCGCCGACCTGGCTCCTTGCTTCGAGGGAGTGATTCCTTCGATCATCGCGACCGCAGCGGCCGACGGGACG
CCGAACGTTTCCTACCTGTC

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MGERIVRLDDGLFEFLHRPLMCIIAGVDRQGRPSAGRGIGLHVPDDRETMDVIFSAWQWPQLEAAIGETARLAVTFVSPA
DYVTFQIKGPARLRDAEDDDLARSDKFIADATGALVSLGVPAEIIPPWLTTRGAKVARLDISEIYVQTPGPQAGLLASMR
QP

Sequences:

>Translated_162_residues
MGERIVRLDDGLFEFLHRPLMCIIAGVDRQGRPSAGRGIGLHVPDDRETMDVIFSAWQWPQLEAAIGETARLAVTFVSPA
DYVTFQIKGPARLRDAEDDDLARSDKFIADATGALVSLGVPAEIIPPWLTTRGAKVARLDISEIYVQTPGPQAGLLASMR
QP
>Mature_161_residues
GERIVRLDDGLFEFLHRPLMCIIAGVDRQGRPSAGRGIGLHVPDDRETMDVIFSAWQWPQLEAAIGETARLAVTFVSPAD
YVTFQIKGPARLRDAEDDDLARSDKFIADATGALVSLGVPAEIIPPWLTTRGAKVARLDISEIYVQTPGPQAGLLASMRQ
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17679; Mature: 17548

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERIVRLDDGLFEFLHRPLMCIIAGVDRQGRPSAGRGIGLHVPDDRETMDVIFSAWQWP
CCCEEEEECHHHHHHHHHHHEEEHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
QLEAAIGETARLAVTFVSPADYVTFQIKGPARLRDAEDDDLARSDKFIADATGALVSLGV
CHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCC
PAEIIPPWLTTRGAKVARLDISEIYVQTPGPQAGLLASMRQP
CHHHCCCCCCCCCCEEEEEEHHHEEEECCCCCHHHHHHCCCC
>Mature Secondary Structure 
GERIVRLDDGLFEFLHRPLMCIIAGVDRQGRPSAGRGIGLHVPDDRETMDVIFSAWQWP
CCEEEEECHHHHHHHHHHHEEEHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
QLEAAIGETARLAVTFVSPADYVTFQIKGPARLRDAEDDDLARSDKFIADATGALVSLGV
CHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCC
PAEIIPPWLTTRGAKVARLDISEIYVQTPGPQAGLLASMRQP
CHHHCCCCCCCCCCEEEEEEHHHEEEECCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA