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The map label for this gene is 87199545

Identifier: 87199545

GI number: 87199545

Start: 1570927

End: 1571700

Strand: Reverse

Name: 87199545

Synonym: Saro_1527

Alternate gene names: NA

Gene position: 1571700-1570927 (Counterclockwise)

Preceding gene: 87199546

Following gene: 87199532

Centisome position: 44.13

GC content: 47.8

Gene sequence:

>774_bases
ATGGGAAAGAAGGGCGTAAAATCGGCAATGCGGACCTTCGAAGTCCTTGAGCTTTTCGAAGAAAAGCGCAAGCCATTGCG
CTTACATGAAATTTACAGCTCTCTGGAATACCCGCAATCCAGCACAACAAACTTGTTAAAGAGCATGGTGTCCATGGGAT
ACCTAAACTACAATCGTCGCAATAGAACCTACCTTCCCTCGACCCGCATCAACATGCTTGGGAATTGGCTCCATGGATAT
TTTCAGTCTTCCGGCGGATACCGAAGCCTTGCAGAGGAGCTTCAACGGAGAATTGACGAGACTGTTGGGATAGTATGCCA
GAATGATCTCTACATACAATACATCATCATGCTAACACCCGCCCATGAGCATAAACTCCCGCCCAACGCCGGCACGATGC
GACTGATGACGGATTCCAGTACCGGGCTCGCGCTCATGGCCCGGATGAAGGATCGCGCGATAGAAAAAATTTGGCGTTTT
ACAAACTACTACAAGCTGAGTGAAAATAACTCATACTCCCTGCCCGAACTTATGCGAGAAGTAAACTGGGTGAGGAAAGT
AGGATATGCCTACATCGCCAAACGCGCAACGCCTGTAACATCGTCCATTGCGATGACTCTGGACGAGGATTTGTTTGGAA
TACCAATGGCCATTGGCGTCGGCGGCATGGCTGATAGAATCGCAAAAAATCAACACGACATCGTTGAGACCATGCGTGAT
CTAATCGAACGTTTTTCGAAAGAGCAGGTGAACTACAACCTTGAAAACAAATAA

Upstream 100 bases:

>100_bases
CCGCCACCGTGCTCTTCTGGCTGTGATCAGTGAGTCCTGAGCCTAGGGCGCGTACCGCCCAGCTGGTGCAATAACAAGCA
TCGGATTCTGTGAGGGAGCC

Downstream 100 bases:

>100_bases
CTTCAAAGACAGTTATACCCCGCTAGGGCGACCAGGCCTCCTGTCCCGATTGCAACTCCGTATGGCAGGCTGGCGCCATC
CTTCCGCGATATCGGCAACC

Product: regulatory proteins, IclR

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein IclR; Regulatory Proteins IclR; IclR Helix-Turn-Helix Domain-Containing; Transcriptional Regulator IclR; Transcription Regulator; Transcriptional Regulator IclR Family

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGKKGVKSAMRTFEVLELFEEKRKPLRLHEIYSSLEYPQSSTTNLLKSMVSMGYLNYNRRNRTYLPSTRINMLGNWLHGY
FQSSGGYRSLAEELQRRIDETVGIVCQNDLYIQYIIMLTPAHEHKLPPNAGTMRLMTDSSTGLALMARMKDRAIEKIWRF
TNYYKLSENNSYSLPELMREVNWVRKVGYAYIAKRATPVTSSIAMTLDEDLFGIPMAIGVGGMADRIAKNQHDIVETMRD
LIERFSKEQVNYNLENK

Sequences:

>Translated_257_residues
MGKKGVKSAMRTFEVLELFEEKRKPLRLHEIYSSLEYPQSSTTNLLKSMVSMGYLNYNRRNRTYLPSTRINMLGNWLHGY
FQSSGGYRSLAEELQRRIDETVGIVCQNDLYIQYIIMLTPAHEHKLPPNAGTMRLMTDSSTGLALMARMKDRAIEKIWRF
TNYYKLSENNSYSLPELMREVNWVRKVGYAYIAKRATPVTSSIAMTLDEDLFGIPMAIGVGGMADRIAKNQHDIVETMRD
LIERFSKEQVNYNLENK
>Mature_256_residues
GKKGVKSAMRTFEVLELFEEKRKPLRLHEIYSSLEYPQSSTTNLLKSMVSMGYLNYNRRNRTYLPSTRINMLGNWLHGYF
QSSGGYRSLAEELQRRIDETVGIVCQNDLYIQYIIMLTPAHEHKLPPNAGTMRLMTDSSTGLALMARMKDRAIEKIWRFT
NYYKLSENNSYSLPELMREVNWVRKVGYAYIAKRATPVTSSIAMTLDEDLFGIPMAIGVGGMADRIAKNQHDIVETMRDL
IERFSKEQVNYNLENK

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29761; Mature: 29630

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKGVKSAMRTFEVLELFEEKRKPLRLHEIYSSLEYPQSSTTNLLKSMVSMGYLNYNRR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
NRTYLPSTRINMLGNWLHGYFQSSGGYRSLAEELQRRIDETVGIVCQNDLYIQYIIMLTP
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
AHEHKLPPNAGTMRLMTDSSTGLALMARMKDRAIEKIWRFTNYYKLSENNSYSLPELMRE
CHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHH
VNWVRKVGYAYIAKRATPVTSSIAMTLDEDLFGIPMAIGVGGMADRIAKNQHDIVETMRD
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHCCCHHHHHHHCCHHHHHHHHHH
LIERFSKEQVNYNLENK
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GKKGVKSAMRTFEVLELFEEKRKPLRLHEIYSSLEYPQSSTTNLLKSMVSMGYLNYNRR
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
NRTYLPSTRINMLGNWLHGYFQSSGGYRSLAEELQRRIDETVGIVCQNDLYIQYIIMLTP
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
AHEHKLPPNAGTMRLMTDSSTGLALMARMKDRAIEKIWRFTNYYKLSENNSYSLPELMRE
CHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHH
VNWVRKVGYAYIAKRATPVTSSIAMTLDEDLFGIPMAIGVGGMADRIAKNQHDIVETMRD
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHCCCHHHHHHHCCHHHHHHHHHH
LIERFSKEQVNYNLENK
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA