Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199181

Identifier: 87199181

GI number: 87199181

Start: 1205522

End: 1205803

Strand: Direct

Name: 87199181

Synonym: Saro_1159

Alternate gene names: NA

Gene position: 1205522-1205803 (Clockwise)

Preceding gene: 87199180

Following gene: 87199182

Centisome position: 33.85

GC content: 64.18

Gene sequence:

>282_bases
ATGGGACCTGATACGCTGGCGCCGCTGATCCCGATTGCGGCCCTGATGATCCCGATCGTCGCGATCTGGACCAAGCATCG
CCAGAAGATCGTCGAGATGCAGACGAAGGCGACTGCTGAACTGAGCGCCGAGAAGGCCGCGCAATACGCCCAGCACACCC
GCGAACTCGAAGAGCGCGTCCGCGTCCTCGAACGCATCGTCACCGACAAGGGCTTCGACACGGCCGCCCAGATCGAGGCA
CTGCGCCGCGATGCTCCCATCCTCGAAGACAGGAGGCCGTGA

Upstream 100 bases:

>100_bases
GCCGACGTCGAGAGCTTCTATGTAAGCTCGAACCCGCGCCTTTCCGCCGAAATCGAGAAGCTGCGCTGAAAGCAGAACCG
TCCTGAGGGGGACTGAAGCC

Downstream 100 bases:

>100_bases
TGCACTGGGGCAGCCCCGAGTTCGTCCTGGCGATCATCGCCATTTCCACCGGCGGATGGCTGGTCAACAACTGGATCCGC
GCCCGCCATGGCTACGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MGPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERVRVLERIVTDKGFDTAAQIEA
LRRDAPILEDRRP

Sequences:

>Translated_93_residues
MGPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERVRVLERIVTDKGFDTAAQIEA
LRRDAPILEDRRP
>Mature_92_residues
GPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERVRVLERIVTDKGFDTAAQIEAL
RRDAPILEDRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10513; Mature: 10382

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLERIVTDKGFDTAAQIEALRRDAPILEDRRP
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLERIVTDKGFDTAAQIEALRRDAPILEDRRP
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA