Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87199181
Identifier: 87199181
GI number: 87199181
Start: 1205522
End: 1205803
Strand: Direct
Name: 87199181
Synonym: Saro_1159
Alternate gene names: NA
Gene position: 1205522-1205803 (Clockwise)
Preceding gene: 87199180
Following gene: 87199182
Centisome position: 33.85
GC content: 64.18
Gene sequence:
>282_bases ATGGGACCTGATACGCTGGCGCCGCTGATCCCGATTGCGGCCCTGATGATCCCGATCGTCGCGATCTGGACCAAGCATCG CCAGAAGATCGTCGAGATGCAGACGAAGGCGACTGCTGAACTGAGCGCCGAGAAGGCCGCGCAATACGCCCAGCACACCC GCGAACTCGAAGAGCGCGTCCGCGTCCTCGAACGCATCGTCACCGACAAGGGCTTCGACACGGCCGCCCAGATCGAGGCA CTGCGCCGCGATGCTCCCATCCTCGAAGACAGGAGGCCGTGA
Upstream 100 bases:
>100_bases GCCGACGTCGAGAGCTTCTATGTAAGCTCGAACCCGCGCCTTTCCGCCGAAATCGAGAAGCTGCGCTGAAAGCAGAACCG TCCTGAGGGGGACTGAAGCC
Downstream 100 bases:
>100_bases TGCACTGGGGCAGCCCCGAGTTCGTCCTGGCGATCATCGCCATTTCCACCGGCGGATGGCTGGTCAACAACTGGATCCGC GCCCGCCATGGCTACGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MGPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERVRVLERIVTDKGFDTAAQIEA LRRDAPILEDRRP
Sequences:
>Translated_93_residues MGPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERVRVLERIVTDKGFDTAAQIEA LRRDAPILEDRRP >Mature_92_residues GPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERVRVLERIVTDKGFDTAAQIEAL RRDAPILEDRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10513; Mature: 10382
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLERIVTDKGFDTAAQIEALRRDAPILEDRRP HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GPDTLAPLIPIAALMIPIVAIWTKHRQKIVEMQTKATAELSAEKAAQYAQHTRELEERV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLERIVTDKGFDTAAQIEALRRDAPILEDRRP HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA