Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is yhaI [H]
Identifier: 87199171
GI number: 87199171
Start: 1197056
End: 1197472
Strand: Direct
Name: yhaI [H]
Synonym: Saro_1149
Alternate gene names: 87199171
Gene position: 1197056-1197472 (Clockwise)
Preceding gene: 87199170
Following gene: 87199174
Centisome position: 33.61
GC content: 63.31
Gene sequence:
>417_bases ATGAACTGGATGATCCTTCCCTATCGGCGCTACGCCGATTTCAGCGGCCGCTCGCGGCGGCGCGAGTACTGGATGTTCGC GTTGTTCTACGTTCTGGTGATGATTGCGCTCAATGCGGTCTTCGGCACGAACGAAGTCGAACGAGGCAACGGCGCATTCT CCTATGGCAGCAGGCTTGTCGGCGCGGGAGGCTGGATCGGCGGGCTGTTCTGGCTGGTCAGCATAGTGCCCGGCCTTGCC GTCAGCGTCCGCCGCCTGCACGACCAGGACCGCACCGGCTGGCTGCTTCTGCTCTGGTTCATTCCTGTCCTTGGATGGTT CGCGCTGCTCGTGCTGATGTGCCTCGAAGGCACGCGCGGCCCTAACCGCTTCGGGCCCGACCCGAAGAATCCCACGCCGG CGGACGTTTTCTCCTAA
Upstream 100 bases:
>100_bases TCATGTGCCTCGAAGGCACGCGCGGTCCCAACCGCTATGGTGAAGATCCGAAGAATCCCGTCGGTTACGACGTCTTCGCC TGACAAACCGGAGCGGCCGC
Downstream 100 bases:
>100_bases AGCTCGCGCAGCACTTGCGCCGGGCGCGTGCGCAGCAGGCCGATCGAGCCTGCCACCGCCAGCACCATCACCAGCGCCAC GCCGGCGGCCAGCACGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNWMILPYRRYADFSGRSRRREYWMFALFYVLVMIALNAVFGTNEVERGNGAFSYGSRLVGAGGWIGGLFWLVSIVPGLA VSVRRLHDQDRTGWLLLLWFIPVLGWFALLVLMCLEGTRGPNRFGPDPKNPTPADVFS
Sequences:
>Translated_138_residues MNWMILPYRRYADFSGRSRRREYWMFALFYVLVMIALNAVFGTNEVERGNGAFSYGSRLVGAGGWIGGLFWLVSIVPGLA VSVRRLHDQDRTGWLLLLWFIPVLGWFALLVLMCLEGTRGPNRFGPDPKNPTPADVFS >Mature_138_residues MNWMILPYRRYADFSGRSRRREYWMFALFYVLVMIALNAVFGTNEVERGNGAFSYGSRLVGAGGWIGGLFWLVSIVPGLA VSVRRLHDQDRTGWLLLLWFIPVLGWFALLVLMCLEGTRGPNRFGPDPKNPTPADVFS
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaH [H]
Homologues:
Organism=Escherichia coli, GI1789491, Length=129, Percent_Identity=39.5348837209302, Blast_Score=98, Evalue=2e-22, Organism=Escherichia coli, GI2367196, Length=129, Percent_Identity=39.5348837209302, Blast_Score=91, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008523 [H]
Pfam domain/function: PF05656 DUF805 [H]
EC number: NA
Molecular weight: Translated: 15705; Mature: 15705
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWMILPYRRYADFSGRSRRREYWMFALFYVLVMIALNAVFGTNEVERGNGAFSYGSRLV CCCEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHH GAGGWIGGLFWLVSIVPGLAVSVRRLHDQDRTGWLLLLWFIPVLGWFALLVLMCLEGTRG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PNRFGPDPKNPTPADVFS CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNWMILPYRRYADFSGRSRRREYWMFALFYVLVMIALNAVFGTNEVERGNGAFSYGSRLV CCCEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHH GAGGWIGGLFWLVSIVPGLAVSVRRLHDQDRTGWLLLLWFIPVLGWFALLVLMCLEGTRG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PNRFGPDPKNPTPADVFS CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]