Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is tatB
Identifier: 87199117
GI number: 87199117
Start: 1137301
End: 1137729
Strand: Direct
Name: tatB
Synonym: Saro_1095
Alternate gene names: 87199117
Gene position: 1137301-1137729 (Clockwise)
Preceding gene: 87199116
Following gene: 87199118
Centisome position: 31.93
GC content: 68.53
Gene sequence:
>429_bases GTGTTCGACATCGGCGCGTCCGAACTTCTGGTGCTGGTCATCGTGGCGATCGTGGTGATCGGCCCGAAGGACCTGCCGCT TGCCCTGCGTACTGCGGGTCGCTGGGTGGCGAAGATGCGCCGTGTCTCCAACCACTTCCGCGCCGGCATCGAGACCATGA TCCGCGAGGCGGAGATGGAGGAGATGGAGCGCAAGTGGAAGGAACAGAACGAGCGCATCATGCGCGAGACGGCGGCGCAG GAAACCGCGGCCGCGCAGGGTCAGACCCCTGCCGCAGCCGAGGACCAGAACGACCCGTTCCCGACGCCGCTGGCCGCCGA TGCCCCCCACACCGATCCCGTAATGACCGGGCCGATGCCGCCCGAGGCAAAGGTTGAGGCCAGGGTCGAGGAAGCGCCGG CTGCCCGGCCGGGGAGCCAGCAACCGTGA
Upstream 100 bases:
>100_bases CGGCATCGCTCCAGCAGACACCGCCGCCGGCCCAGCCCGCGCCGCAGCCGACTTCGACCGACCAGGCCCAGTAAGCCTCG GCAAGCAAGGCGACAGGGCC
Downstream 100 bases:
>100_bases TCTCTGACATCGATGAAACCCAGGCGCCGCTGCTGGACCACCTGCTCGAACTGCGCACGCGGTTGCTGCGCTGCGTCTAT GCGCTGATCGTGGCTTTCGC
Product: twin-arginine translocation protein TatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MFDIGASELLVLVIVAIVVIGPKDLPLALRTAGRWVAKMRRVSNHFRAGIETMIREAEMEEMERKWKEQNERIMRETAAQ ETAAAQGQTPAAAEDQNDPFPTPLAADAPHTDPVMTGPMPPEAKVEARVEEAPAARPGSQQP
Sequences:
>Translated_142_residues MFDIGASELLVLVIVAIVVIGPKDLPLALRTAGRWVAKMRRVSNHFRAGIETMIREAEMEEMERKWKEQNERIMRETAAQ ETAAAQGQTPAAAEDQNDPFPTPLAADAPHTDPVMTGPMPPEAKVEARVEEAPAARPGSQQP >Mature_142_residues MFDIGASELLVLVIVAIVVIGPKDLPLALRTAGRWVAKMRRVSNHFRAGIETMIREAEMEEMERKWKEQNERIMRETAAQ ETAAAQGQTPAAAEDQNDPFPTPLAADAPHTDPVMTGPMPPEAKVEARVEEAPAARPGSQQP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATB_NOVAD (Q2G9D3)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496374.1 - STRING: Q2G9D3 - GeneID: 3916391 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1095 - NMPDR: fig|48935.1.peg.1270 - OMA: KTAKPAD - ProtClustDB: CLSK843811 - BioCyc: NARO279238:SARO_1095-MONOMER - HAMAP: MF_00237 - InterPro: IPR018448 - InterPro: IPR003998 - PRINTS: PR01506 - TIGRFAMs: TIGR01410
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15550; Mature: 15550
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15112168)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDIGASELLVLVIVAIVVIGPKDLPLALRTAGRWVAKMRRVSNHFRAGIETMIREAEME CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMERKWKEQNERIMRETAAQETAAAQGQTPAAAEDQNDPFPTPLAADAPHTDPVMTGPMP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEAKVEARVEEAPAARPGSQQP CCHHHHHHHHHCCCCCCCCCCH >Mature Secondary Structure MFDIGASELLVLVIVAIVVIGPKDLPLALRTAGRWVAKMRRVSNHFRAGIETMIREAEME CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMERKWKEQNERIMRETAAQETAAAQGQTPAAAEDQNDPFPTPLAADAPHTDPVMTGPMP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEAKVEARVEEAPAARPGSQQP CCHHHHHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA